| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3149 |
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| Symbol | |
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| ID | 4674241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3328386 |
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| End bp | 3330629 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639840191 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_987350 |
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| Protein GI | 121595454 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.439153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGCA GTTCCATCGG CCATCTGCCC ATGGGGCAGG GCGCGGCCGC CGGGCCCCGA
CCCGAGGCGG TGCCGCAGCT CATCGCAGCC ACCGCGCAGG CGGGACCGGA GCATGCCGAC
GCACTGGTAC GCGCCCGCGC CTTTGCCGAG CCGCTCTTGA TCGGCGAAAC GTTGGAAACC
GGAGAGAACA CCCTCGTCCA TGCCGATGCG GTGTCCGCCA TCCTCAAGCA CCTGGGCGGC
TCGGAAACCA TGCAGGCGGC GGCCTATCTG GTGTATGCCT GCTCGCACCT GAACAAGCCC
GAGGAAGTGA TCACCAAGGC CTTCGGCAGC AATTTCGCCG CGCTGGCGCT GGAGACCACC
AAGCTCATGC GCGTGCAACT GCAGGCGCGC GAGGCGCAGG TGATGGGCCA GCAGGTGGAC
GATGCGGCCA CGCAGACCGA GAACGTGCGC AAGATGCTGC TGGCCTTCTC GCGCGACCTG
CGCGTGGTGA TGCTGCGCCT GGCGTCCCGC CTGCAGACGC TGCGCTTTTA CGCCGCAGCC
AAGCGCCCGG TATCGCCGGC CATCGCGCGC GAGGCGCTGC AGGTGTTCGC GCCGCTGGCC
AACCGCCTGG GCATCTGGCA GATGAAGTGG GAGCTGGAAG ATCTGGCCTT CCGCTTCCTG
GAGCCCGAGA CCTACAAGGA AGTGGCCCGC CTGCTCGACG AGAAGCGCGT GGAGCGCGAG
CTGTACATGG AGCAGGTGCG CAGCCGGCTG GAGTCCGAAT TGCGCGCGCG CAGCATCAGC
GCCAGCGTGC AGGGCCGGCC CAAGCACATC TACAGCATCG TCAAGAAGAT GCGTGGCAAG
TCGCTGAACT TCGACCAGGT GTTCGACATC CGTGCGCTGC GTGTAGTGGT GCCGAGCGTC
AAAGACTGCT ATGCCGCTTT GAGCTGGGTG CACAGCCAGT TCAAGCCCAT CGAGGCGGAG
TTCGACGACT ACATCGCCCG CCCCAAGCCC AATGGCTACC AGTCGCTGCA CACCGTGGTG
CGCGACGAGG CGGGCAAGGC CATCGAGATC CAGATCCGCA CCCAGGCCAT GCACGACCAT
GCCGAGCATG GCGTGGCCGC GCACTGGGCC TACAAGGAGG CGGGCACCAA GGGCTACGCT
GGCGTGTCGG CCAGCAGCGA GTACGACGCC AAGATCGCCG TACTGCGCCA GCTGCTGGCG
TGGGAGCGCG ACCTGGTGGG CTCCGCCAGC CGCAGCGGGT TGTTCGAAGA CCGCATCTAT
GTGCTGACCC CGGACGCGGC CGTGGTGGAA CTACCCCAGG GCGCCACGCC CGTGGACTTC
GCCTATGCCG TGCACACCAG CGTCGGCCAC CGCTGCCGGG GTGCGCGTGT CGACGGCAAC
ATGGTGCCGC TGAACACGCC GCTGCAAAAC GGCCAGACGG TGGAGATCAC CACCGTGAAG
GAAGGGCGTC CTTCGCGCGA CTGGCTCAAC CCGGAACTGG GCTACCTCAC CAGCAACCGC
GCGAAGGCCA AGGTGCGCGC GTGGTTCAAC GCACAGGCCA CCCATGCCAC GGTGGCGCGC
GGCCGCGAGC TGGTGGAAAA GCTGCTGCAG CGCGAGGGCA AGACGGCCCT CAAGCTTGAC
GACCTGGCGG TGCAGCTGGG CTTCAAGTCG GCCGAGGCCT TGTTCGAAGT GGTGGGCAAG
GACGAATTCT CGCTGCGCAG CATCGAGACC CTGTTGCGCC CACCCGAGCC GGCGGTCGAT
GAGCCTGACG TGCTGCTCAA GAAGGCGCGC ACACCCGACG GTGCGCCCAA GGGCGGCGTG
CTGGTGGTGG GCGTGGATTC CCTCATGACG CAGTTGGCCA AGTGCTGCAA GCCCGCGCCG
CCCGATGAGA TCCGTGGTTT CGTCACGCGC GGCAAGGGCG TGAGCGTGCA CCGCGCCGAC
TGCAGCAACT TCCGCGAGAT GGCGGCGCGC AATGCGGAGC GCGTGATCGA CGTGGAGTGG
GGAAAGTCGC AGCGCGCCGC CGGAGAAGCC GCCGTCTACC CCGTGGACGT GGCGGTGGAA
GCCTCGGACC GCCAGGGCCT GCTGCGCGAC ATCTCGGAAG TGTTCGCGCG CGAGAAGACC
AACGTCATCG GCGTGCAGAC ACAGTCCGTC AAGGGAACGG CATGGATGAC CTTCACCGTG
GAAGTGTCCG ATGCGGGGCG GCTCAACAAG GTGCTGGGTA TCGTGGCCGC GGTGCAGGGG
GTGCGGTCGG CGCGCCGGCG ATGA
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| Protein sequence | MKSSSIGHLP MGQGAAAGPR PEAVPQLIAA TAQAGPEHAD ALVRARAFAE PLLIGETLET
GENTLVHADA VSAILKHLGG SETMQAAAYL VYACSHLNKP EEVITKAFGS NFAALALETT
KLMRVQLQAR EAQVMGQQVD DAATQTENVR KMLLAFSRDL RVVMLRLASR LQTLRFYAAA
KRPVSPAIAR EALQVFAPLA NRLGIWQMKW ELEDLAFRFL EPETYKEVAR LLDEKRVERE
LYMEQVRSRL ESELRARSIS ASVQGRPKHI YSIVKKMRGK SLNFDQVFDI RALRVVVPSV
KDCYAALSWV HSQFKPIEAE FDDYIARPKP NGYQSLHTVV RDEAGKAIEI QIRTQAMHDH
AEHGVAAHWA YKEAGTKGYA GVSASSEYDA KIAVLRQLLA WERDLVGSAS RSGLFEDRIY
VLTPDAAVVE LPQGATPVDF AYAVHTSVGH RCRGARVDGN MVPLNTPLQN GQTVEITTVK
EGRPSRDWLN PELGYLTSNR AKAKVRAWFN AQATHATVAR GRELVEKLLQ REGKTALKLD
DLAVQLGFKS AEALFEVVGK DEFSLRSIET LLRPPEPAVD EPDVLLKKAR TPDGAPKGGV
LVVGVDSLMT QLAKCCKPAP PDEIRGFVTR GKGVSVHRAD CSNFREMAAR NAERVIDVEW
GKSQRAAGEA AVYPVDVAVE ASDRQGLLRD ISEVFAREKT NVIGVQTQSV KGTAWMTFTV
EVSDAGRLNK VLGIVAAVQG VRSARRR
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