| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3132 |
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| Symbol | |
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| ID | 4673391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3307721 |
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| End bp | 3308341 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639840173 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_987333 |
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| Protein GI | 121595437 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.675803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAC TCTTACTCGG CATCGATGCC GTGTCCACCT TCATCGGCAA GGCGGCGGCC
TGGGCCGTCG TGGGCCTGAC GGCCCTGATC TGCTGGGAGG TCTTCTCGCG CTACGCGCTG
AACAACCCCC ATGCCTGGGT GCTGGACGCA CAGATCATGC TGTACGGCAC CATGTTCATG
CTGGCGGGCG CCTACACCCT GGCCAAGAAC GGCCACGTGC GCGGCGACGT GCTGTACGGC
TTCTTCAGCC CGCGCGTGCA GGCCGGGCTG GACCTGCTGC TCTACATCCT GTTCTTCCTG
CCGGGCGTGC TGGCCATGAC CTGGGCCGGC TGGACCTATG CGCAGGAATC GCTGGCCATC
CGCGAGCAGA CGTTCTCCGC CACGCCGCTG CCGCTGTACC CCTTCAAGTT CGTGATTCCC
CTGGCGGGCG CCGTGCTGCT GCTGCAGGGG CTGGCGGAGA TCGCGCGCTG CGTGATCTGC
CTGCGCCAGG GCGCGTGGCC CCGGCGCGGC GAGGACGTGG AAGAGGTGGA CGTCGAGAAG
CTCAAGGAGA TGGTGCACGT GAACGACAGC GACCTGCAGG TGCCGGCTCC CGCATCCGCC
GCGCAGGGGG GCAAGCCATG A
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| Protein sequence | MQKLLLGIDA VSTFIGKAAA WAVVGLTALI CWEVFSRYAL NNPHAWVLDA QIMLYGTMFM
LAGAYTLAKN GHVRGDVLYG FFSPRVQAGL DLLLYILFFL PGVLAMTWAG WTYAQESLAI
REQTFSATPL PLYPFKFVIP LAGAVLLLQG LAEIARCVIC LRQGAWPRRG EDVEEVDVEK
LKEMVHVNDS DLQVPAPASA AQGGKP
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