Gene Ajs_3073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3073 
Symbol 
ID4670584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3241129 
End bp3243090 
Gene Length1962 bp 
Protein Length653 aa 
Translation table11 
GC content67% 
IMG OID639840119 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_987279 
Protein GI121595383 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0168838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.191593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTCG ACACCCTCCA CGCCATCCTG CCCGCCACCG CGCGCGACGA CCGCCAGATC 
ACGCTCATCG AGGGCGACAA GGAGCAGCGC GTGCTGAGCT TCCAGCGGCT GCGCCAGCGC
GCGCTCGCCG TGCTCGGCGC GCTCCAGCGC CAGTCGATCG CGCCCGGCGA CACGATGATC
CTGTGCCTGG CCGACAACGA GCGCTTCCTG GAAATGTTCT GGGCCTGCGT GCTGGGCGGC
ATCGTGCCGG TGCCGCTCGC GCCCGGCGCC ACCGATGCGC ACCGCCAGAA GCTGCTGCGT
GTGTTCGCGC AGCTCGGCCC GAAGGCGTCG GTCTACATCG ACCGCACGTC GCTGGAACGC
CTCGACGGCT TCGCCGCGGC ACAAGGGCTG GCCGACCAGG CGGCGGCGCT GCGTGCCCGC
GCCCTGGTTC CGGGCGGCCT CGACATCGGC GGCGAACCGG GACAGCCCGT GTCGCCGCGT
CCGGACGACC TGGCGTTCAT CCAGTATTCC TCCGGCTCCA CCGGCGAGCC CAAGGGCGTG
CTGCTAACGC ACCGCAACCT GTGCGCCAAC ATCGCCGCGA TCATCGAGGC CGCGGCCTTC
TCCGACCGCG ACGTGGCGCT CAGCTGGATG CCGCTGTCCC ACGACATGGG GCTGATCGGC
TTCCACCTGA ACATGCTGGC CTGCGGCGCC AGCCACGCGA TCATGCGCAC CGACCTGTTC
GCGCGGCGCC CCCTGCTCTG GCTCGACCAG GCCAGCCAGC GCCGGGCCAC GGTGCTGTGC
TCGCCGAACT TCGGCTACCA GCATTACCTG CGGCAGTTCG CGCTGAAGCC GCCCCAGGGG
CTGGACCTGT CGGCCGTGCG ACTGATCTTC AATGGCGCCG AACCGATCTC GGCCGATTTG
TGCCGGCGTT TCACCCAGGC CATGGCGCCC CATGGACTCC AGCCGAATGC CATGTTTCCG
GTGTACGGGT TGGCCGAAGC CAGCCTGGCG GTGAGCTTCC CGCCCCCATC GACACCGCTA
GAGACGATCG AGCTCGACCG GACAGCCCTT CGTGTCGGCG CGCCCGTGCG CGCTGCGGCA
CCTGGGTCGA CGCATGCCAT CGAATTCGTC AAGCTCGGCC GCGCCGTGCC CGGATGCGAG
ATCCGGATCG TGGACGACGC CGGCACCGGC TTGGCCGACC GGACGGTCGG CCATGTTCAG
ATCCGGGGCG ACAACGTGTC CGGTGGCTAT TTTCGGGACA GGAGCGGCAA CGGTGCCTCG
CGGGTGACAC CCGGATGGCT GGACACCGGC GACCTGGGCG TGATGCTGGA CGGGCAGCTC
GTGATCACGG GTCGGGCCAA GGACCTGATC ATCGTCAACG GACAGAACTA CTACCCGACC
GATCTGGAGG AGATCGCCCA ACAGGTGCCC GGTATCGAGG CCAACCGGGT GGCAGCGGTC
GGGGTGCGCG ACGCCAGCGA AGGCACCGAA TCGGTCGCGC TGTTCGTGAT CCACCGCGGG
GATCTGGCGG GCTTCGTGCC GAAAGTTCAG GCTTTGCGAC GCATCATCGG CCAGCAAACC
GACCTGGAAC TGAACCACAT CGTGCCTGTC AGCGCCATTC CGAAGACCAC CAGTGGCAAG
CTGCAACGGT ATGCTTTGGC CCTCGCCTTC GAACAAGGCG AATTCGCTAC AATACGCTCG
GAATTGGCAG GGTTTATGTC AGCGAACGCC GCGATCGAAC CTGTCGAGGC AGGGCCGAAA
TCAACGGCTC TGCGCCTCAA GGAGATCTGC GAGCCATTGA TTCCAGACCA GCAGATCACG
GTCCAAACCA ACTTGCTGGA AATCAACCTC AAATCGCTCA CTCTGGCGCG CATCCATGAA
GCGATCGAGC GCGAATTCCC CCAGCGGATC GAGGTCACGG ATCTTTTCGA ATACCCGACG
CTGGAGCAGC TGGCGAAACT TCTGGACGAA ACCCAGACTT GA
 
Protein sequence
MPFDTLHAIL PATARDDRQI TLIEGDKEQR VLSFQRLRQR ALAVLGALQR QSIAPGDTMI 
LCLADNERFL EMFWACVLGG IVPVPLAPGA TDAHRQKLLR VFAQLGPKAS VYIDRTSLER
LDGFAAAQGL ADQAAALRAR ALVPGGLDIG GEPGQPVSPR PDDLAFIQYS SGSTGEPKGV
LLTHRNLCAN IAAIIEAAAF SDRDVALSWM PLSHDMGLIG FHLNMLACGA SHAIMRTDLF
ARRPLLWLDQ ASQRRATVLC SPNFGYQHYL RQFALKPPQG LDLSAVRLIF NGAEPISADL
CRRFTQAMAP HGLQPNAMFP VYGLAEASLA VSFPPPSTPL ETIELDRTAL RVGAPVRAAA
PGSTHAIEFV KLGRAVPGCE IRIVDDAGTG LADRTVGHVQ IRGDNVSGGY FRDRSGNGAS
RVTPGWLDTG DLGVMLDGQL VITGRAKDLI IVNGQNYYPT DLEEIAQQVP GIEANRVAAV
GVRDASEGTE SVALFVIHRG DLAGFVPKVQ ALRRIIGQQT DLELNHIVPV SAIPKTTSGK
LQRYALALAF EQGEFATIRS ELAGFMSANA AIEPVEAGPK STALRLKEIC EPLIPDQQIT
VQTNLLEINL KSLTLARIHE AIEREFPQRI EVTDLFEYPT LEQLAKLLDE TQT