| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3037 |
|---|
| Symbol | |
|---|
| ID | 4671346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 3202109 |
|---|
| End bp | 3203335 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639840087 |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_987247 |
|---|
| Protein GI | 121595351 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0163402 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAATA CCGCTTTCTC ACCCTGGCCC AGCTTCACCG CAGAAGAGGC CGCCGCCGTG
CAGCAAGTGC TGCTGTCCAA CAAGGTCAAT TACTGGACTG GCACCGAGTG CCGTGCCTTT
GAAAAAGAGT TTGCCGCCTG GGCTGGTGTG CCCCATGCCG TGGCGCTGGG CAATGGCACC
CTGGCGCTAG ACGTAGCCTT GCAGGCGTTG GGCATTGGCC CGGGGGACGA AGTGGTGGTT
ACGCCGCGCA CCTTCATTGC GTCGGTCTCT TGTGTGGTGA ATGCTGGTGC GGTGCCGGTG
TTTGCCGAGG TGGATGCCGA CAGCGGCAAC ATCACTGCCG ACACCATTGC TGCCGTGTTG
ACGCCGCGCA CCAAGGCCGT CATTTGCGTG CACCTGGCCG GCTGGCCCTG CGACATGGAC
CCCATCATGG CGCTGGCCGA TCAGCACGGG CTGAAGGTGA TTGAAGACTG CGCCCAGGCG
CATGGCGCGC GCTATCGTGG CCGCAGCGTG GGCAGCATTG GCCATGTAGG CGCCTGGAGT
TTTTGCCAGG ACAAGATCAT GACCACGGGC GGCGAGGGCG GCATGGTCAC CACCAACGAC
GAGGCCCTGT GGCGCGCCAT GTGGTCGTTC AAGGACCACG GCAAGAGCTA CGCGGCGGTC
TATGAGCGCG AGCACCCGCC GGGCTTTCGC TGGCTGCACG AAAGCTTTGG CACCAACTGG
CGCATGCTGG AAATGCAGGC CGCCATTGGC CGCATCCAGT TGCGCCAGAT GTCGTCGTGG
ACGGCGGCCC GCACCACCAA CGCCGCCGTG CTGGCCCAGG CTTTGGCCCC GTTCGCTGGC
CCGCAGGGTG TGGTGCGTTT GCCGCAATTT CGCTGCGGTC GCAGCTGCCC GGCGGCGGGC
ACCTGCAACG CCGGCTGTGT GCACGCCCAG TACAAGGCCT ACGCCTACGT GCGCCCCGAA
AACCTGGCCC CCGGGTGGAG CCGTGACCGC ATCGTGCAAG AAATCAATGC TCTGGGTGTC
CCCTGCTACC AGGGAAGTTG CTCTGAGGTT TATCTGGAAA AGGCCTTCGA CAACACCGGC
TGGCGCCCAG AATCCCGCTT ACCCGTGGCC AAGGCGCTAG GTGAGACCAG CCTGATGTGG
CTGGTGCACC CCACACTGAC TCCCGCAGAG ATGGCCAAAA CCGCCGAGGT GACGGCGCAG
GTGCTGGCCC AAGCGGGTGG GGATTGA
|
|---|
| Protein sequence | MLNTAFSPWP SFTAEEAAAV QQVLLSNKVN YWTGTECRAF EKEFAAWAGV PHAVALGNGT
LALDVALQAL GIGPGDEVVV TPRTFIASVS CVVNAGAVPV FAEVDADSGN ITADTIAAVL
TPRTKAVICV HLAGWPCDMD PIMALADQHG LKVIEDCAQA HGARYRGRSV GSIGHVGAWS
FCQDKIMTTG GEGGMVTTND EALWRAMWSF KDHGKSYAAV YEREHPPGFR WLHESFGTNW
RMLEMQAAIG RIQLRQMSSW TAARTTNAAV LAQALAPFAG PQGVVRLPQF RCGRSCPAAG
TCNAGCVHAQ YKAYAYVRPE NLAPGWSRDR IVQEINALGV PCYQGSCSEV YLEKAFDNTG
WRPESRLPVA KALGETSLMW LVHPTLTPAE MAKTAEVTAQ VLAQAGGD
|
|---|
| |