| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2921 |
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| Symbol | |
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| ID | 4673945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3092812 |
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| End bp | 3093846 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639839977 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_987137 |
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| Protein GI | 121595241 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATGC CGAAGAAAGC CAAGATCACC AGTGCCGTGC TGCTGCTCGC AGTCGCAGCG
GGCTGTGTCA TTTATCTGAA TCGTCCCGAG TCCAGCGCAT CGACCCAATC CACGGACGAC
GCCTATGTAC AGGCTGATTT CACCCTCGTC GCGCCCCAGG TGTCGGGAGT GATCGGCAAG
GTACTGGTCG AAGAAAACCA GCCAGTGAAG GCAGGGGATT TGCTCGCAGC CATCGACGAC
CGGGATTTCA TCGTTGCGGT GGATGCGGCA AAGGCACAAG TCGCCGCCGC CGAGGCCAGC
GTCGCGGGGC TTGCCGCGCG TGTGGCGCAG CAAGAAACCG CGATCCGCCA AGCGCAGGCA
GCCGTTGCGG TGGACGATGC CGAACTCAAA CTGGCAGAGG CCAACCAAAA ACGCTATCGC
AACTTGGCAG CCGATGGATC TGGTTCGATC CAGGCACAAC AACAGGCCGA AGCGCAGTTG
GCCATTCGGC TGGCCAGCCG GGACAAGAAC CGCGCGGGCC TGCAAGCGGC GCGGCAGCAA
ACGGACATCC TGAAAGCCGA TCTTGAAAAG GCCAAGGCTG CGCTTTCTCA AGCGCAGGCC
GCACAGGCGG CTGCGGAGTT GAAGCTTTCC TATACCCAAA TCACCGCGCC CATCAACGGC
ATGATCGGCC AGAAGTCGGT ACGTGTCGGC GCATTCGTGA ATGCTGGCAA GCCGTTGCTG
GCGGTGATTC CACTCGATGC CCTCTATATC ACGGCCAACT TCCGCGAGAC GCAGTTGGCG
CGTGTACGGG CCGGACAATC GGTGGACATC AAGGTGGACG CCTTGCCGGG TGCCGTACTG
AAGGGAACCG TGGAAAGCCT GGGGCCGGCC AGTGGCGTCA GCTATTCGGC TGTCGCGCCA
CACAACGCCA CGGGCAACTT CACCAAGATC GTCCAGCGCC TGCCTGTGCG CATTCGCATC
GACCCCGACC AGCTTGACGC TGCAAACCTG CGCGTCGGCA TGTCCGTGAC GCCGAAGATC
CGCATCGGTG AATAG
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| Protein sequence | MAMPKKAKIT SAVLLLAVAA GCVIYLNRPE SSASTQSTDD AYVQADFTLV APQVSGVIGK
VLVEENQPVK AGDLLAAIDD RDFIVAVDAA KAQVAAAEAS VAGLAARVAQ QETAIRQAQA
AVAVDDAELK LAEANQKRYR NLAADGSGSI QAQQQAEAQL AIRLASRDKN RAGLQAARQQ
TDILKADLEK AKAALSQAQA AQAAAELKLS YTQITAPING MIGQKSVRVG AFVNAGKPLL
AVIPLDALYI TANFRETQLA RVRAGQSVDI KVDALPGAVL KGTVESLGPA SGVSYSAVAP
HNATGNFTKI VQRLPVRIRI DPDQLDAANL RVGMSVTPKI RIGE
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