| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2911 |
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| Symbol | |
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| ID | 4673030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3085033 |
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| End bp | 3086067 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639839968 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_987128 |
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| Protein GI | 121595232 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCG TTCCTTCCTT CACCGCCGTT TCACTGGATC GCCGCATCCT GATGCTGCGC
ACGGCGATGG GGCCGCTGAT CGCCGCCGCG CTGGAAGACC CGGACGTGGT GGAAATCATG
CTCAACCCGG ATCGCACCTT GTGGATCGAC CGGCTTTCGT CGGGTCGCGC GCCGATGGGT
GTGGAGCTGT CCGAGGCCGA CGGCGAACGA ATCATCCGGC TGGTCGCGGC CCACGTCGGC
GCGGAAGTCC ACCGCGGCCA GCCACTGTTG ACGGCGGAAC TGCCCGAGAC GGGCGAACGC
TTCGAGGGCA TCCTGCCGCC CGCTGCGCCG GGGCCGGCCT TTGCGTTGCG CAAGCGCGCC
TTTGGCGTGA TCCCGCTGTC GCGCTACATC GAGGACGAAA TGATGACCGC CGCGCAGGCG
GGCTTGCTGG TGCGCGCCGT GCGCGAACGC CAGAACATCC TGATCGCCGG CGGGACGAGT
ACCGGCAAGA CCACCTTGGC CAATGCGCTA TTGGCCGAGA TCGCCGCCAC GGGCGACCGC
GTATTGGTGC TCGAAGACAC GGTGGAGCTG CAATGCGCGG CCCGCGACCA CGTGCCGCTG
CGCACACGCC AGGGCGTGGT GTCCATGACC GAGCTGGTGC GATCTTCGAT GCGCCTGCGC
CCGGATCGTG TCGTCGTCGG CGAGGTGCGT GGCGCCGAGG CATTGGATCT CATCAAAGTC
TGGGGCACTG GCCATCCGGG CGGCATCGCC ACCATCCACG CCGGCTCCGT ACTGGGCGCA
CTGCTGCGCC TGGAGCAACT GATTCTCGAA GTGGCGGTGA ACCCGCCCCG TGCGCTGATC
GCGGAAGCGG TCAACGTGGT GATCCACATC GCCGGGCGCG GACGCAAGCG CCGCATCGAG
AGCATCGCCC GCGTCGTCGG CTTCGATGGC GTGGGCTACC AACTGGCGGA TGCGCTGGAG
GCTCCATTCC CGGAGCTGCT GCCGCAGTCC GACCTTTCCT CCCTGTCCCC TGACCACTCT
GGAGAACTTC CATGA
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| Protein sequence | MSAVPSFTAV SLDRRILMLR TAMGPLIAAA LEDPDVVEIM LNPDRTLWID RLSSGRAPMG
VELSEADGER IIRLVAAHVG AEVHRGQPLL TAELPETGER FEGILPPAAP GPAFALRKRA
FGVIPLSRYI EDEMMTAAQA GLLVRAVRER QNILIAGGTS TGKTTLANAL LAEIAATGDR
VLVLEDTVEL QCAARDHVPL RTRQGVVSMT ELVRSSMRLR PDRVVVGEVR GAEALDLIKV
WGTGHPGGIA TIHAGSVLGA LLRLEQLILE VAVNPPRALI AEAVNVVIHI AGRGRKRRIE
SIARVVGFDG VGYQLADALE APFPELLPQS DLSSLSPDHS GELP
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