| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2902 |
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| Symbol | |
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| ID | 4671925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3076590 |
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| End bp | 3077852 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639839959 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_987119 |
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| Protein GI | 121595223 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.629829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGG ACGATTCCCC TGACCTTGCA CCGCAGGCGG GCAAGGTCGT GCCCGAGGCG
GTGGCGCTGC GCGCCCAGCC GCGCCCGGTC ACACGCCTGA ACCGGCGCAC GCTAGTCATG
CTCACCGGCG GCCTGTCGGT CGCCGTGCTC GGGGCCACGA TCTGGTCATT GCAGCCGCAC
CGGCGCGCGG GTGAGCAGAC CGAGCTGTAC AACGTCGATC GCGTGTCGAA GTCCGAAGGG
CTGGATGGCT TGCCTTCGGA TTACTCCAAG CTGCCGAAGG TGCCGGAACT GGGGCCGCCG
CTGCCGGGCG ACCTTGGCCC GGCCATCGTG AAGTCGCAGC AGCCCGTGGC GCCCACCTAC
GCGCCGCCGG GCCACGACCC GGAGGATGCA CGGCGCAAGG AAGCTGAAGC GGCAGCAGCT
TCCTCGGTGT TCTTCCGCTC GGGCACGCCT GGCAAGACCG CCGCGCCAGC GACTGCGCAA
GTCGGTGCGG CTGGCCAAGC ATCGGCCTTG GCGGGCTTCG ACCCGCTGGC CGCCGGGCCA
GCCTCGACGG CGGCTCAGCC TGCCGACCCG ACCGCTGTGC AAAACCGGCA AGACCAAAAA
GAGGCGTTCC TGAAGGGCGG CTCTACGGAG ACCCGCAATT CCGGGAATCT GAAAATGCCG
TCCTCGCCGT ATCAGGTGAT GGCCGGGACG GTGATCGCCG GCGCGCTGGT GACGGGCATC
AAGTCGGACT TGCCGGGCGA CGTGATCGCC ACGGTGACGG AGCCGGTCTA TGACACGGCC
ACGGGCAAGT TCCTGCTGAT TCCGCAGGGC TCGCGCATCC TGGGCAAGTA CAACAGCCAG
GTGAGCTATG GGCAAAGCCG GGTTCAGGTG GTTTGGAACC GCATCATCCT GCCGGACACG
TCCTCGCTGA CGCTAGACAA CCTCGTGGGC ACCGATCCGG CCGGCTATTC CGGCCTGGAA
GACGGGGTGG ACTACCACTG GAGCCGCATC GTCGCCGGTG CCGCGCTGAC GACGCTGCTG
GGCGTGGGCG CCGAGCTGGC CGCGCCGGAG AACCGGCAGG ACGGTAATCG CATCATCATC
GCCGGCCGCG ACAGCGCGCA GGACAGCATC AATCAGGTCG GCCAGGAGAT GACCCGGCGC
AACATGAACA TCCAGCCGAC GCTGACTGAA CGGCCCGGCC TGCCGGTGCG GATCATCGTC
AACCGCGACT TGGTGTTGCG GCCGTACCAG CCGATGTTCT TCCAGCGGGG AGCGATGCAA
TGA
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| Protein sequence | MSQDDSPDLA PQAGKVVPEA VALRAQPRPV TRLNRRTLVM LTGGLSVAVL GATIWSLQPH
RRAGEQTELY NVDRVSKSEG LDGLPSDYSK LPKVPELGPP LPGDLGPAIV KSQQPVAPTY
APPGHDPEDA RRKEAEAAAA SSVFFRSGTP GKTAAPATAQ VGAAGQASAL AGFDPLAAGP
ASTAAQPADP TAVQNRQDQK EAFLKGGSTE TRNSGNLKMP SSPYQVMAGT VIAGALVTGI
KSDLPGDVIA TVTEPVYDTA TGKFLLIPQG SRILGKYNSQ VSYGQSRVQV VWNRIILPDT
SSLTLDNLVG TDPAGYSGLE DGVDYHWSRI VAGAALTTLL GVGAELAAPE NRQDGNRIII
AGRDSAQDSI NQVGQEMTRR NMNIQPTLTE RPGLPVRIIV NRDLVLRPYQ PMFFQRGAMQ
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