| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2881 |
|---|
| Symbol | |
|---|
| ID | 4670722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 3053048 |
|---|
| End bp | 3054604 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639839938 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_987098 |
|---|
| Protein GI | 121595202 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
|---|
| TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00897132 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGACG CCAACCTCCA AGCCCAATTG AAAGCCTATC TGGAGCGCCT GCAGCGCCCG
GTGGAGCTGG TCGCCACGCT GGACGATGGC GCCACTTCCC AAGAGCTGCG GGAACTGCTC
CAGGAGATCC GCTCTCTCTC CGACAAGATC ACCGTGGTCG AGAAGAACGA CGCGCCCGTG
CGCAAGCCGT CCTTCCTGAT CACCAACCCC GGCGTGGACA CCGGCGTGCG TTTCGCGGGC
GTCCCCCTGG GCCATGAGTT CACCTCGCTG GTGCTGGCGC TGCTGCAGGT GGGCGGCCAT
CCCTCCAAGG AATCGGCGGA CCTGCTGGAG CAGGTGAAGA ACCTGGACGG CGATTTCCAT
TTCGAGACGT ACTACTCGCT GTCCTGCCAC AACTGCCCCG ACGTGGTCCA GGCGCTGAAC
CTGATGAGCG TGCTCAACCC GCGCATCACG CACACGGCCA TCGACGGCGC CGTGTTCCAG
GACGAGATCA AGGAACGCCA AATCATGGGC GTGCCCACCG TGTTCCTGAA CGGCAAGAAC
TTCGGCCAGG GCCGCATGGA GCTGGCGGAG ATCGTGGCCA AGATCGACAG CGGCGCCCAT
GCCCGCGTGG CCGCCAAGCT CAATGCCATG GAGCCGTTCG ACGTGCTGGT GGTCGGCGGT
GGTCCCGCCG GTGCCGCGGC CGCCGTGTAT GCGGCGCGCA AGGGCATTCG TACCGGCGTG
GTGGCCGAGC GCTTCGGCGG CCAGGTGCTG GATACGGTGG ACATCGAGAA CTACATCTCG
GTCAGCAAGA CCGAGGGCCC CAAGTTCGCC ATCGCGCTGG AGCAGCACGT GAACGACTAC
GACGTCGAGG TGATGAACCT GCAGCGCGCC AAGGCCCTCA AGCCCGCCGC AACGGAAGGC
GGCCTGGTGG AAATCGAACT CGACAACGGC GCGACGCTCA AGAGCAAGAC CGTGATCCTG
TCGACCGGCG CGCGCTGGCG CAACATGAAC GTGCCGGGCG AGGAGCAGTA CCGCACCAAG
GGCGTGACGT ACTGCCCGCA CTGCGACGGC CCGCTGTTCA AGGGCAAGGA CGTGGCGGTC
ATCGGCGGCG GCAACTCGGG CGTGGAGGCC GCGATCGACC TCGCGGGCAT CGTCAAGAGC
GTGACGGTGC TGGAGTTCGC CAGCGAGTTG AAGGCCGATG GCGTGCTGCA GAAAAAGCTG
CGCAGCCTGC CCAACGTGAC GGTCATCCTG AACGCCCAGA CCACGGAAGT GAATGGCGAT
GGCAGCAAGG TCACCGGCCT GACCTACAAG GACCGCACGA CGGACGAGGC CAAGACCGTG
GCGGTCGAGG GCATCTTCGT GCAGATCGGT CTGTTGCCCA ACACCGACTG GCTCAAGGGC
ACGGTGGACC TGACGCGCTT TGGCGAGATC ATCATCGACG CCCGGGGCCA CACCAACGTG
CCGGGCGTGT TCGCCGCGGG AGACTGCACC AACGTGCCGT ACAAGCAGAT CATCATCGCC
GCGGGGGCGG GCGCGACGGC GGCCTTGTCG GCCTTCGACC ACCTGATTCG CCACTGA
|
|---|
| Protein sequence | MLDANLQAQL KAYLERLQRP VELVATLDDG ATSQELRELL QEIRSLSDKI TVVEKNDAPV
RKPSFLITNP GVDTGVRFAG VPLGHEFTSL VLALLQVGGH PSKESADLLE QVKNLDGDFH
FETYYSLSCH NCPDVVQALN LMSVLNPRIT HTAIDGAVFQ DEIKERQIMG VPTVFLNGKN
FGQGRMELAE IVAKIDSGAH ARVAAKLNAM EPFDVLVVGG GPAGAAAAVY AARKGIRTGV
VAERFGGQVL DTVDIENYIS VSKTEGPKFA IALEQHVNDY DVEVMNLQRA KALKPAATEG
GLVEIELDNG ATLKSKTVIL STGARWRNMN VPGEEQYRTK GVTYCPHCDG PLFKGKDVAV
IGGGNSGVEA AIDLAGIVKS VTVLEFASEL KADGVLQKKL RSLPNVTVIL NAQTTEVNGD
GSKVTGLTYK DRTTDEAKTV AVEGIFVQIG LLPNTDWLKG TVDLTRFGEI IIDARGHTNV
PGVFAAGDCT NVPYKQIIIA AGAGATAALS AFDHLIRH
|
|---|
| |