Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2825 |
Symbol | |
ID | 4673571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2989947 |
End bp | 2991347 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639839882 |
Product | Fis family transcriptional regulator |
Protein accession | YP_987042 |
Protein GI | 121595146 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.506795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.45265 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC AAGAATCCCC AAGCTCTTCC AGCGCCCCCG CTTCCCATGC CGCCGCGGCG GCCCCGCAGC GCCTGCAGGC CCTGCTGGGC GACGGCCTGC GCCGGCGCTG GTGGCAGAGC ATCACCCTGT GGCTGGCCGT GCTGGTGCTG GCCGCCGCTG CCGGCGGCTG GTGGTACTGG CAGGACCGCC AGCGCGCCCA GGCGGCGCCG CGCTATGTCA CGCAGGAGGT GCAGCGCGGG CAGATCACGC TCACCGTGGC GGCCAACGGC ACGCTGCAGC CCACGCGGTC GGTGAACATC GGCAGTGAAC TCTCGGGCAC CGTGCGCCGC GTGCTGGTGG ACGTGAACGA CCAGGTCAAG AAGGGCCAGG TGCTGGTGGA GCTGGACACC ACCAAGCTCG ACTCGCAGGT GCTGCGCTCG CGCGCTTCGG TCGCGTCGGC GCAGGCGCGC CTGGCACAGG CGCAGGCGAC CATGCAGGAG GCGCGCGCCA GCCTGTCTCG CCTGGAGGAG GTGGCCCGCC TGTCCGGCGG CAAGGTGCCT TCGGCGGCCG AGCTGGACAC CGGCCGCGCC GCCTACGAGC GCGCCCAGGC CGACGAGGCC GCTGCGCGCG CCAGCGTGCA GGATGCGCGC GCGGCGCTGG CCACCGACGA GACCAACGTC ACCAAGGCCT CCATCCGATC GCCGATCGAC GGGGTGGTGC TCTCGCGCGC GGTGGAGCCG GGCAATGCCG TGGCCGCGTC GCTGCAGGCG GTGACGCTGC TCACCCTGGC AGAGGACCTG ACCAAGCTGC GCCTGGAGGT CAACGTGGAC GAGGCCGACG TGGGCTCGGT GCGCCCGGGC CAGAAGGCCA CCTTCACCGT GAGCGCCTAC CCCTCGCGGC GCTACCCGGC GCGCACCACG CGCGTGGCCT TCGGCTCCAC CAAGACCGAC AACGTGGTCA CCTACATCAC CTACCTGGAG GTGGACAACG GCGATCTGAG CCTGCGCCCC GGCATGACGG CCGCGGCCAC CATCACCTCC ACCGAGCGCA ATGACGTGCT TACCGTGCCC AACACGGCCC TGCGCTTCAA GCCCGCGAGC GCGGCGGGGG AAGCCCCCCA GGCAGGCCGG CCCGGTGCAC AGGGCAGCTC TGGCGCAAGC GCGGGCGGCA GCGGCGGCAT CATGTCCCAG CTCATGCCGC GCATGCCGCG CCCCTCGGGC CAGCGGCGCA GCGCGGGCGC GGACGGCAGC CGCGGCGACG GCCCCCAGCG CCAGGTGTGG GTGCTGCAGG ACGGCACGCC CAAGCCCGTG CGCGTGAAGA CCGGCATCAG CGACGGCCGC GTCACCGAGG TGGAGAGCGA CGAGCTGCAG CCGGGCATGC AGGTCATCAC CGACCAGCTT GCGAGCGGGG CGAAGCCATG A
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Protein sequence | MTDQESPSSS SAPASHAAAA APQRLQALLG DGLRRRWWQS ITLWLAVLVL AAAAGGWWYW QDRQRAQAAP RYVTQEVQRG QITLTVAANG TLQPTRSVNI GSELSGTVRR VLVDVNDQVK KGQVLVELDT TKLDSQVLRS RASVASAQAR LAQAQATMQE ARASLSRLEE VARLSGGKVP SAAELDTGRA AYERAQADEA AARASVQDAR AALATDETNV TKASIRSPID GVVLSRAVEP GNAVAASLQA VTLLTLAEDL TKLRLEVNVD EADVGSVRPG QKATFTVSAY PSRRYPARTT RVAFGSTKTD NVVTYITYLE VDNGDLSLRP GMTAAATITS TERNDVLTVP NTALRFKPAS AAGEAPQAGR PGAQGSSGAS AGGSGGIMSQ LMPRMPRPSG QRRSAGADGS RGDGPQRQVW VLQDGTPKPV RVKTGISDGR VTEVESDELQ PGMQVITDQL ASGAKP
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