Gene Ajs_2825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2825 
Symbol 
ID4673571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2989947 
End bp2991347 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content73% 
IMG OID639839882 
ProductFis family transcriptional regulator 
Protein accessionYP_987042 
Protein GI121595146 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.506795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.45265 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC AAGAATCCCC AAGCTCTTCC AGCGCCCCCG CTTCCCATGC CGCCGCGGCG 
GCCCCGCAGC GCCTGCAGGC CCTGCTGGGC GACGGCCTGC GCCGGCGCTG GTGGCAGAGC
ATCACCCTGT GGCTGGCCGT GCTGGTGCTG GCCGCCGCTG CCGGCGGCTG GTGGTACTGG
CAGGACCGCC AGCGCGCCCA GGCGGCGCCG CGCTATGTCA CGCAGGAGGT GCAGCGCGGG
CAGATCACGC TCACCGTGGC GGCCAACGGC ACGCTGCAGC CCACGCGGTC GGTGAACATC
GGCAGTGAAC TCTCGGGCAC CGTGCGCCGC GTGCTGGTGG ACGTGAACGA CCAGGTCAAG
AAGGGCCAGG TGCTGGTGGA GCTGGACACC ACCAAGCTCG ACTCGCAGGT GCTGCGCTCG
CGCGCTTCGG TCGCGTCGGC GCAGGCGCGC CTGGCACAGG CGCAGGCGAC CATGCAGGAG
GCGCGCGCCA GCCTGTCTCG CCTGGAGGAG GTGGCCCGCC TGTCCGGCGG CAAGGTGCCT
TCGGCGGCCG AGCTGGACAC CGGCCGCGCC GCCTACGAGC GCGCCCAGGC CGACGAGGCC
GCTGCGCGCG CCAGCGTGCA GGATGCGCGC GCGGCGCTGG CCACCGACGA GACCAACGTC
ACCAAGGCCT CCATCCGATC GCCGATCGAC GGGGTGGTGC TCTCGCGCGC GGTGGAGCCG
GGCAATGCCG TGGCCGCGTC GCTGCAGGCG GTGACGCTGC TCACCCTGGC AGAGGACCTG
ACCAAGCTGC GCCTGGAGGT CAACGTGGAC GAGGCCGACG TGGGCTCGGT GCGCCCGGGC
CAGAAGGCCA CCTTCACCGT GAGCGCCTAC CCCTCGCGGC GCTACCCGGC GCGCACCACG
CGCGTGGCCT TCGGCTCCAC CAAGACCGAC AACGTGGTCA CCTACATCAC CTACCTGGAG
GTGGACAACG GCGATCTGAG CCTGCGCCCC GGCATGACGG CCGCGGCCAC CATCACCTCC
ACCGAGCGCA ATGACGTGCT TACCGTGCCC AACACGGCCC TGCGCTTCAA GCCCGCGAGC
GCGGCGGGGG AAGCCCCCCA GGCAGGCCGG CCCGGTGCAC AGGGCAGCTC TGGCGCAAGC
GCGGGCGGCA GCGGCGGCAT CATGTCCCAG CTCATGCCGC GCATGCCGCG CCCCTCGGGC
CAGCGGCGCA GCGCGGGCGC GGACGGCAGC CGCGGCGACG GCCCCCAGCG CCAGGTGTGG
GTGCTGCAGG ACGGCACGCC CAAGCCCGTG CGCGTGAAGA CCGGCATCAG CGACGGCCGC
GTCACCGAGG TGGAGAGCGA CGAGCTGCAG CCGGGCATGC AGGTCATCAC CGACCAGCTT
GCGAGCGGGG CGAAGCCATG A
 
Protein sequence
MTDQESPSSS SAPASHAAAA APQRLQALLG DGLRRRWWQS ITLWLAVLVL AAAAGGWWYW 
QDRQRAQAAP RYVTQEVQRG QITLTVAANG TLQPTRSVNI GSELSGTVRR VLVDVNDQVK
KGQVLVELDT TKLDSQVLRS RASVASAQAR LAQAQATMQE ARASLSRLEE VARLSGGKVP
SAAELDTGRA AYERAQADEA AARASVQDAR AALATDETNV TKASIRSPID GVVLSRAVEP
GNAVAASLQA VTLLTLAEDL TKLRLEVNVD EADVGSVRPG QKATFTVSAY PSRRYPARTT
RVAFGSTKTD NVVTYITYLE VDNGDLSLRP GMTAAATITS TERNDVLTVP NTALRFKPAS
AAGEAPQAGR PGAQGSSGAS AGGSGGIMSQ LMPRMPRPSG QRRSAGADGS RGDGPQRQVW
VLQDGTPKPV RVKTGISDGR VTEVESDELQ PGMQVITDQL ASGAKP