| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2796 |
|---|
| Symbol | |
|---|
| ID | 4674355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 2959694 |
|---|
| End bp | 2960398 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639839853 |
|---|
| Product | succinate dehydrogenase subunit B |
|---|
| Protein accession | YP_987013 |
|---|
| Protein GI | 121595117 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.218703 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCA CTTTCAAGAT CTACCGCTAC GACCCGGACA AGGACGCCAA GCCCTACATG
CAGACCGTGG AGGTCGAGCT CGACGGCCAC GAACGCATGC TGCTGGATGC ATTGCTCAAG
CTCAAGGCAC AGGATCCCAC GCTGTCGTTC CGCCGCTCCT GCCGCGAAGG CGTGTGCGGC
TCCGACGCCA TGAACATCAA CGGCAAGAAC GGCCTGGCCT GCCTGACGAA CATGAAGACC
CTCTCGGGCG ACATCGTCTT GAAGCCCCTG CCCGGCCTGC CGGTGATCCG CGACCTGATC
GTGGACATGA CGCAGTTTTT CAAGCAGTAC CACTCGATCA AGCCCTACCT GCAAAGCGAC
ATCTACGCGT CGCCCACCAA GGAGCGCCTG CAGTCGCCCG AAGAGCGTGA AGAGCTCAAC
GGCCTGTACG AGTGCATTCT GTGCGCCAGC TGCTCCACGA GCTGCCCCTC GTTCTGGTGG
AACCCCGACA AGTTCGTGGG TCCCGCCGGC CTGCTGCAGG CCTACCGCTT CATCGCGGAC
AGCCGCGACA CGGCCACGGG CGAGCGCCTG GACAACCTGG AAGACCCCTA CCGCCTGTTC
CGCTGCCATA CCATCATGAA CTGCGTGGAC GTGTGCCCCA AGCACCTGAA CCCCACGCGC
GCGATTGGCA AGATCAAGGA ATTGATGGCA CGCCGTGCCA TCTGA
|
|---|
| Protein sequence | MKRTFKIYRY DPDKDAKPYM QTVEVELDGH ERMLLDALLK LKAQDPTLSF RRSCREGVCG
SDAMNINGKN GLACLTNMKT LSGDIVLKPL PGLPVIRDLI VDMTQFFKQY HSIKPYLQSD
IYASPTKERL QSPEEREELN GLYECILCAS CSTSCPSFWW NPDKFVGPAG LLQAYRFIAD
SRDTATGERL DNLEDPYRLF RCHTIMNCVD VCPKHLNPTR AIGKIKELMA RRAI
|
|---|
| |