| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2795 |
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| Symbol | |
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| ID | 4674335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2957858 |
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| End bp | 2959663 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639839852 |
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| Product | succinate dehydrogenase subunit A |
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| Protein accession | YP_987012 |
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| Protein GI | 121595116 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0609564 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTACA CCAAAGCCAA CATCACCAAG CGCAAGTTCG ACGTGGTCAT CGTGGGGGCC
GGCGGCTCCG GCATGCGCGC CTCGCTGGAA CTGTCGCGCG CGGGCCTGAA CGTGGCCTGC
CTGTCCAAGG TCTTCCCCAC CCGCTCGCAC ACCGTGGCAG CGCAAGGCGG CGTGTCCGCA
TCGCTGGGCA ACATGAGCGA AGACAACTGG CACTACCATT TCTACGACAC CATCAAGGGC
GGCGACTGGC TGTCCGACCA GGACGCCGTC GAGTTCATGT GCCGCGAAGC ACCCAAGGTG
GTGATCGAGC TCGAGCATTT CGGCATGCCG TTCGACCGCA ACCCCGACGG CACCATCTAC
CAGCGCCCCT TTGGCGGCCA CACGGCCAAC TACGGTGAGA AGCCCGTGCA GCGCGCCTGC
GCCGCGGCCG ACCGTACCGG CCACGCCATG CTGCACACGC TGTACCAGAA GAACGTCGAA
TCCAAGACCA ACTTCTTCGT GGAATGGATG GCGCTGGACC TGATCCGCGA CGCTGAGGGC
GACGTGGTCG GCGTAACCGC GCTGGAACTG GAAACCGGCG ACCTGTACGA ACTGCACGCC
AAGGCCGTGC TGCTGGCCAC AGGCGGCGCT GGCCGCATCT TTGCGGCATC GACCAACGCC
TTCATCAACA CCGGCGACGG CCTGGGCATG GCCGCACGCG CGGGCATCCC GCTGCAGGAC
CTGGAGTTCT GGCAGTTCCA CCCCACCGGC GTGGCCGGCG CGGGCGTGCT GCTGACCGAA
GGCTGCCGCG GCGAAGGCGC CATCCTGCTG AACAGCAATG GTGAGCGTTT CATGGAGCGT
TACGCGCCCA CCTTGAAGGA CCTGGCACCG CGCGACTTCG TGTCCCGCTC GATGGACCAG
GAGATCAAGG AAGGCCGTGG CTGCGGTCCC AACAAGGACT ACATCCTGAT GAAGCTCGAC
CACCTGGGCG CTGACACCAT CCGCAAGCGC CTGCCGTCGG TGGAAGAGAT CGGCCACAAC
TTCGCCAACG TGGACATCAC CAAGGAACCG ATCCCCGTCG TGCCCACCAT CCACTACCAG
ATGGGCGGCA TTCCGACCAA TATCCACGGC CAGGTCGTCA CCTGGGACGG CGAGAAGAAC
AACGTGGTCA ATGGCCTGTA CGCCGTCGGC GAATGCGCCG CGGTGTCGGT GCACGGCGCC
AACCGCCTGG GCACGAACTC GCTGCTCGAC CTGTTGGTGT TCGGCAAGTC GGCCGGCAAG
CACATCGTGC AATTCGTTGG GGGCTACGGC GAGCACAAGG CCGTGCCGGC CGACGGCAGC
GACCGCACCC TGGCGCGCCT GAACCAGTTG GAAGAATCCA AGGACGGCGT CTACGCCCAG
GACCTGGCCA ACGACATCCG CCAGACCATG CAGCAGCACG CCGGCGTGTT CCGCACGCAA
AAGGGCATGG ACGAAGGCGT GGTCAAGATC AACGCCATCC GCGAGCGCGT GGGCACCGTG
ACCCTGAAGG ACAAGTCCAA GGTCTGGAAC ACCGCACGCA TGGAAGCGCT GGAAGTGGAC
AACCTGATCG AGGTCGCCCA GGCCACGATG ACCTCGGCCG CGGCCCGCCA GGAGTGCCGT
GGCGCACACA CCGTGGACGA CTACGAGCAT CCTGCCGACC ATCCCGACTT CCCGTTGGGC
CGCAATGACA AGGAGTGGCT CAAGCACACG CTGTGGCACA GCGCCAGCAA CAGCCTGAGC
TACAAGCCCG TGAACATGAA GCCCCTGACG GTGGACAGCA TTCCTCCGAA GGTCCGCACG
TTCTAA
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| Protein sequence | MSYTKANITK RKFDVVIVGA GGSGMRASLE LSRAGLNVAC LSKVFPTRSH TVAAQGGVSA
SLGNMSEDNW HYHFYDTIKG GDWLSDQDAV EFMCREAPKV VIELEHFGMP FDRNPDGTIY
QRPFGGHTAN YGEKPVQRAC AAADRTGHAM LHTLYQKNVE SKTNFFVEWM ALDLIRDAEG
DVVGVTALEL ETGDLYELHA KAVLLATGGA GRIFAASTNA FINTGDGLGM AARAGIPLQD
LEFWQFHPTG VAGAGVLLTE GCRGEGAILL NSNGERFMER YAPTLKDLAP RDFVSRSMDQ
EIKEGRGCGP NKDYILMKLD HLGADTIRKR LPSVEEIGHN FANVDITKEP IPVVPTIHYQ
MGGIPTNIHG QVVTWDGEKN NVVNGLYAVG ECAAVSVHGA NRLGTNSLLD LLVFGKSAGK
HIVQFVGGYG EHKAVPADGS DRTLARLNQL EESKDGVYAQ DLANDIRQTM QQHAGVFRTQ
KGMDEGVVKI NAIRERVGTV TLKDKSKVWN TARMEALEVD NLIEVAQATM TSAAARQECR
GAHTVDDYEH PADHPDFPLG RNDKEWLKHT LWHSASNSLS YKPVNMKPLT VDSIPPKVRT
F
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