Gene Ajs_2660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2660 
Symbol 
ID4674483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2824828 
End bp2825799 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content61% 
IMG OID639839723 
Productintegrase catalytic subunit 
Protein accessionYP_986887 
Protein GI121594991 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.271661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATTG CCCTGCACAA GAACGCCCGC ACCACGCCTG CAGTGCGTGC CGAGATTGCG 
GCCAGCAGTG AGACCGCCCC TGTGCTGGCC CAACGCTATG GCATCACCGA GCAGACGGTC
TACAAGTGGA AGAAGCGTGA AGTCTTTGGA GATCGCTCGC ACACGGCGCA CCATTTGCAG
ACTGTGCTCA CGCCAGCGCA AGAGACCGTG GTGGTCCACC TGCGGCGCAC CTTGCTGTTG
CCCCTGGATG ACCTGTTGGC GGTCACGCGC GAGTTCATTT GCCCCCATGT CTCGCGCTCA
GGCCTGGACC GCTGCCTGCG CCGCCATGGG GCCGGCAACC TCAACGCCCT CAAGCCCCAG
GAGCCACAGC CTGTGCACAA GGCGTTCAAG ACCTACGAGC CAGGCTATGT GCACATGGAC
GTGAAGTACC TGCCCCAGAT GCAGGACGAG AGCAGCAGAC GCTATCTGTT CGTGGCCATT
GACCGGGCCA CGCGCTGGGT GTTTGTGCAG TTCAAGGCCA ACAAGACGGC GGCCAGTGCA
CAGGCCTTCC TGAAGGCACT GCACAAGGCC TGTCCGATCA GGATCAACAA GCTGCTGACA
GACAACGGCA AGGAGTTCAC GGACCGCCTG TTTGCCAGCA AGGAACGCGA ACCCAGCGGC
AACCATGAGT TCGACCAACT GTGCCGGGAA CTGGGCATAG AGCACCGGCT GACCAAGCCC
AGGACACCCA GAACCAATGG CATGGTGGAG CGGTTCAATG GCCGCATTGC GGACGTTCTG
AAGACCCACC GGTTCAACAG CCGTGAAGAT ATGGAGCAGA CCTTGCAGCG CTATGTGGCC
TTGTACAACC ACCAGCTGCC GCAGTCAGCA CTGGGCAGCA AGACGCCGAT GCAGGCCATG
AAGCAGTGGT ACCTGGAGAG GCCGGATCTG TTTCATAAGC GGCCATATGA TCGTCCGGGA
TGCAACACGT AG
 
Protein sequence
MLIALHKNAR TTPAVRAEIA ASSETAPVLA QRYGITEQTV YKWKKREVFG DRSHTAHHLQ 
TVLTPAQETV VVHLRRTLLL PLDDLLAVTR EFICPHVSRS GLDRCLRRHG AGNLNALKPQ
EPQPVHKAFK TYEPGYVHMD VKYLPQMQDE SSRRYLFVAI DRATRWVFVQ FKANKTAASA
QAFLKALHKA CPIRINKLLT DNGKEFTDRL FASKEREPSG NHEFDQLCRE LGIEHRLTKP
RTPRTNGMVE RFNGRIADVL KTHRFNSRED MEQTLQRYVA LYNHQLPQSA LGSKTPMQAM
KQWYLERPDL FHKRPYDRPG CNT