| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2609 |
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| Symbol | |
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| ID | 4674151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2775814 |
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| End bp | 2777547 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639839676 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_986843 |
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| Protein GI | 121594947 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.209081 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTTG AAGAACTGAA GCTGGCGCCG GCCATTTTGC GGGCCGTGCA AGAACAAGGC
TACGACAACC CGACCCCTAT CCAGGCCCAG GCCATCCCGG CCGTCCTCGC TGGACACGAC
CTCCTCGCCG GCGCACAGAC CGGCACCGGC AAGACCGCCG CGTTCACGCT GCCCATGCTG
CACCGCCTGG CCGAAGGCCA AGCCCCACGC AGCCAGTTTG GCGGCAAGGG TGTGCGCGCC
CTGGTGCTCA CGCCCACGCG GGAGCTGGCA GCGCAGGTCG AAGAATCCGT GCGCGGCTAC
GGCAAATACC TGGATCTGAA CTCCACCGTG ATCTTCGGCG GCGTCGGTAT GAACCCGCAG
ATCGAACGCA TCAAGCGCGG CGTGGACGTG CTGGTGGCCA CCCCTGGCCG CCTGCTGGAC
CTGCAGCAGC AAGGCTTCAT GGACCTGTCC ACCGTCGAGA TCCTGGTGCT GGACGAAGCC
GACCGCATGC TCGACATGGG ATTCATCCAC GACGTGAAGA AGGTGCTGGC GCTGCTGCCC
CAGTCCAAGC AAAGCCTGCT GTTCTCGGCC ACGTTCAGCG ACGACATCCG TGAACTGGCC
AACTCACTGC TCAAGAACCC GCAGAGCATC CAGGTCACCC CGCGCAACAC CACGGTGCAA
CGCATCAGCC AGGTGATCCA CCCCGTGGGG CGCGGCAAGA AGAAGCAGGT GCTGCTGCAC
ATCATCCAGG AGCACGACTG GAGCCAGGTG CTGGTGTTCA CGCGCACCAA GTTCGGCGCC
AACAACGTGG CCGAGTACCT GACCAAGAAC GGCGTTTCGG CCATGGCGCT GCATGGCAAC
AAGAGCCAGA GCGCCCGCAC CCAGGCGCTG GAGGGCTTCA AGACGGGCCA GATCCGCGCC
CTGGTGGCTA CCGACATCGC GGCACGCGGC ATCGACATCG ACGACCTGCC GCACGTCGTG
AACTACGAAA TCCCCAACGT GCCCGAGGAC TATGTGCACC GCATCGGCCG CACGGGCCGC
GCCGGCCGCG AGGGCCATGC CGTGAGCCTC GTCTGCATGG ACGAGGAAGG TTTCATGATG
GAGATCGAGC GCTTCACCAA GCAGGAAATC CCCGTGCAGG TGATCGACGG CTTTGGCCCG
GACGAGGGAG AGAAGGCCGA GCCCATCGCC ATGGGCCGCC AGACCATCTG GGGCGGCGCG
GGCAAGCCGC CCAGCCGCGA AGTCATGCAG GCCGCGGCCA AGGCGGCACG CCAGGAGATG
ATGGAGCGCA TCCGCACCAA CAAGGCGGCC ACTGGCGGCC AGCGCGGTTC GCGCCAAGGC
GGTGGCCAGG GCGAAGGCCA GCAGCGCGCC GGGGGTCAGA ACGGCAGCGG GGGCCGCGGC
GGCAACGCAG GCAATGCAGG CCGTCCTGCC GGTCCACGTG ATCAGCAACG TCCGCAGAAC
ACGGCCGGTG GCCGCCGCCG CGGCGGTCCC GCGGGTGCAG GCAATGGCGG CGGTAATGGC
GGAAATCGCC GTTTCGACGA CAGCCAGCCT CGCAGCGAGA ACGCCCACCT GGGCACGCAG
CTCGGCAACA TTGGCATCGG CCCACGCCAT GGCAGCGGCC GTGCCAGCCA GCCGGACCCC
ATGCGCACCA GCGTGGACAG CATGGCGGAC CGCGGGCGTC GGGGCGGCTT CGGCCGTGGC
AACGGCGGCG GCGGTGGTGG CCGCGGCCCA CGCGGCGGCG GCTTCGGCCG CTGA
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| Protein sequence | MTFEELKLAP AILRAVQEQG YDNPTPIQAQ AIPAVLAGHD LLAGAQTGTG KTAAFTLPML
HRLAEGQAPR SQFGGKGVRA LVLTPTRELA AQVEESVRGY GKYLDLNSTV IFGGVGMNPQ
IERIKRGVDV LVATPGRLLD LQQQGFMDLS TVEILVLDEA DRMLDMGFIH DVKKVLALLP
QSKQSLLFSA TFSDDIRELA NSLLKNPQSI QVTPRNTTVQ RISQVIHPVG RGKKKQVLLH
IIQEHDWSQV LVFTRTKFGA NNVAEYLTKN GVSAMALHGN KSQSARTQAL EGFKTGQIRA
LVATDIAARG IDIDDLPHVV NYEIPNVPED YVHRIGRTGR AGREGHAVSL VCMDEEGFMM
EIERFTKQEI PVQVIDGFGP DEGEKAEPIA MGRQTIWGGA GKPPSREVMQ AAAKAARQEM
MERIRTNKAA TGGQRGSRQG GGQGEGQQRA GGQNGSGGRG GNAGNAGRPA GPRDQQRPQN
TAGGRRRGGP AGAGNGGGNG GNRRFDDSQP RSENAHLGTQ LGNIGIGPRH GSGRASQPDP
MRTSVDSMAD RGRRGGFGRG NGGGGGGRGP RGGGFGR
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