| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2585 |
|---|
| Symbol | rpsB |
|---|
| ID | 4672918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2749553 |
|---|
| End bp | 2750305 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639839652 |
|---|
| Product | 30S ribosomal protein S2 |
|---|
| Protein accession | YP_986819 |
|---|
| Protein GI | 121594923 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0052] Ribosomal protein S2 |
|---|
| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.56603 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.062437 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTCA CCATGCGTGA AATGCTGGAA GCCGGTGTCC ACTTTGGCCA CCAAACGCGC
TTCTGGAACC CCAAGATGGC CCCCTTCATC TTCGGCCATC GCAACAAGAT TCACATCATC
AACCTGGAAA AGTCGCTGCC GATGTTCCAG GAGGCGCAGA AGTTCGCCAA GCAGTTGGCC
GCCAACCGCG GCACGATCCT GATGGTCGGC ACCAAGCGCC AGGCCCGCGA ACTGGTGGCC
GAGCAGGCCC AGCGCGCTGG CGTGCCCTAT GTTGACCAGC GCTGGCTGGG CGGCATGCTG
ACCAACTTCA AGACCGTCAA GACCTCCATC AAGCGCCTGA AGGACATGAA GGCACAGCAG
GAAGCCGGCC TGGAGTCCAT GAGCAAGAAG GAGCAGCTGA TGTTCTCGCG CGAACTGGAA
AAGCTCGAGA AGGACATCGG GGGCATTCAG GACATGGCTG CGCTGCCCGA CGCTATCTTC
GTGATCGACG TGGGCTACCA CAAGATCGCC GTGTCCGAAG CCAAGAAGCT GGGTATCCCG
CTGATCGGTG TGGTGGATTC CAACCACTCG CCCGAGGGTA TTGACTACGT GATCCCGGGT
AACGACGACT CGGCCAAGGC TGTGGCTCTG TACGCCCGCG GCATCGCCGA CGCTATCCTT
GAAGGCCGTG CCAACGCCGT GACGGAAGTG GCCAAGGCTG TGGCTGCCGA AGGCTCCGAC
GAATTCGTGG AAGTGGACGA GAACGCCGCC TAA
|
|---|
| Protein sequence | MSVTMREMLE AGVHFGHQTR FWNPKMAPFI FGHRNKIHII NLEKSLPMFQ EAQKFAKQLA
ANRGTILMVG TKRQARELVA EQAQRAGVPY VDQRWLGGML TNFKTVKTSI KRLKDMKAQQ
EAGLESMSKK EQLMFSRELE KLEKDIGGIQ DMAALPDAIF VIDVGYHKIA VSEAKKLGIP
LIGVVDSNHS PEGIDYVIPG NDDSAKAVAL YARGIADAIL EGRANAVTEV AKAVAAEGSD
EFVEVDENAA
|
|---|
| |