| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2575 |
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| Symbol | lpxD |
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| ID | 4671797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2738984 |
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| End bp | 2739964 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639839642 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| Protein accession | YP_986809 |
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| Protein GI | 121594913 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0621866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCTTGC GACTCGGGCA GATCGTCGAT GCACTTGGGG GCAGCCTGGA AGGAGGGGAG
AGGGATACCG AAATCCTCCG CATCGCCCCG CTGGAATCCT CCGGCCCGGG TGACCTGTCC
TTCCTGAGCA ATCCGCGCTA CCAGTCACAA CTGGCCGCCT CCCAGGCGGC CTGTGTCATT
GTGGCCCCCG CGATGCGCAA TGCAGCCTTG GAGCGCGGCG CTTGCATCGT TGTGGAGCAG
CCCTACACGT ACTTTGCACA CGTGACGCAG CTGTGGGTGC GCGCGCATGG CCAAGGTGCG
CCTGCGGGCA TCCACCCCAG CGCCGTGGTC GATCCGCAAG CCCGGGTGGC CCCGACAGCC
TCGATCGGTC CCCTGTGCGT GGTCGAGCGC GGCGCAGTGA TTGGAGCGCA CACGGTGCTC
AAGTCGCGGG TGACGGTCGG CGAGCGTTGC ACGGTTGGCG AGCGCTGCAT CCTGCACCCT
GGCGTGGTCA TCGGGGCCGA TGGCTTCGGC TTTGCGCAGC AGCGCGGCGA ATGGATCAAG
ATCGAGCAAC TGGGCGCGGT GCGCATCGGC AACGATGTGG AGATCGGTGC GAACACCTGC
ATCGACCGCG GAGCGCTCGA CGACACGGTC ATCGAAGACG GCGTCAAGCT CGACAACCTG
ATCCAGATTG CGCACAACGT GCACATCGGC CGCCACACCG CCATGGCGGG CTGTTCCGCG
GTGGCGGGCA GCACCCGCAT CGGCGCGCAC TGCACGATTG CAGGGGCCGC GTCCATCGTG
GGGCACCTGC AGTTGGCGGA CAATGTGCAC ATCTCCACCA ACACGGTGGT GACGCACTCG
ATCACGCAAC CGGGGCAGTA CACCGGGGTG TTTCCCATGG ACGACAATGC GAAGTGGGAA
AAGAACGCGG CCACGCTGCG GCAGCTGTAC CGGCTGCGTG AACGCATCAA GGCTCTCGAA
CAAACACGAA AAGACGGCTA G
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| Protein sequence | MSLRLGQIVD ALGGSLEGGE RDTEILRIAP LESSGPGDLS FLSNPRYQSQ LAASQAACVI
VAPAMRNAAL ERGACIVVEQ PYTYFAHVTQ LWVRAHGQGA PAGIHPSAVV DPQARVAPTA
SIGPLCVVER GAVIGAHTVL KSRVTVGERC TVGERCILHP GVVIGADGFG FAQQRGEWIK
IEQLGAVRIG NDVEIGANTC IDRGALDDTV IEDGVKLDNL IQIAHNVHIG RHTAMAGCSA
VAGSTRIGAH CTIAGAASIV GHLQLADNVH ISTNTVVTHS ITQPGQYTGV FPMDDNAKWE
KNAATLRQLY RLRERIKALE QTRKDG
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