Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2571 |
Symbol | rnhB |
ID | 4671871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2735942 |
End bp | 2736571 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639839638 |
Product | ribonuclease HII |
Protein accession | YP_986805 |
Protein GI | 121594909 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.480513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0641 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATCCA GAACCTCCTT GCTTGAACAG GCCGCCCTGG ACTGGCATCC GCCCGGCCTC GTTGCCGGCG TGGATGAGGC CGGGCGTGGG CCGTTGGCCG GCCCCGTGGT GGCGGCTGCG GTGATCCTGG ACGACCTGCA GCCCATCGCT GGCCTGGCCG ACTCCAAGGT GCTAACGGCC GCACGGCGCG AGAAGCTCTA CGACGAGATC CGCGCCAAGG CGCTGTGCTG CAGCATTGCG GAAGCATCGG TGGAGGAGAT CGATCAACAC AATATCCTGC AAGCCACGAT GCTGGCCATG CGCCGTGCGG TGCTGGGGCT GCGGCTGAAG CCGGTGCGGG TGTTGGTGGA TGGCAATCGC TTGCCGCCGC TGGACGTTCC GGCGGAGGCC ATCGTCAAGG GCGATGCGCT GGTCGCATCG ATCTCAGCCG CCTCCATTCT TGCAAAGGTC ACGCGCGACC GCTGGTGCGC GCAATTGCAC CAGCAATACC CGGTGTATGG CTTTGCCGGC CATAAGGGCT ACGGCACGGC AGAGCACCTG GCCGCGCTGG AAGTGCATGG GGCCTGTCCC CAGCACCGGC GCTCGTTCGC GCCGGTGGCG CGCGCCTTGC AGGCGCCCGT CGCCGCCTGA
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Protein sequence | MRSRTSLLEQ AALDWHPPGL VAGVDEAGRG PLAGPVVAAA VILDDLQPIA GLADSKVLTA ARREKLYDEI RAKALCCSIA EASVEEIDQH NILQATMLAM RRAVLGLRLK PVRVLVDGNR LPPLDVPAEA IVKGDALVAS ISAASILAKV TRDRWCAQLH QQYPVYGFAG HKGYGTAEHL AALEVHGACP QHRRSFAPVA RALQAPVAA
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