Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2555 |
Symbol | |
ID | 4670536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2717336 |
End bp | 2718175 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639839620 |
Product | putative transmembrane anti-sigma factor |
Protein accession | YP_986789 |
Protein GI | 121594893 |
COG category | [K] Transcription |
COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00539506 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGCCCG ACCCTTTCAG TCCTTCGGAC GAGACGCATC TGCATGCTTT GGCGGACGAC CGGCTGCCGC GCGCCCAGGC AGAGTCGCTG CACTCCCGCA TGGACTCCTC GCAGAGGCAG CGTGCCGAAG CGTGGGCGCA ACAGCGTGCG CAGCTGCAGA CCCTGCACGC TGACTGGTTG CGGCAGCCTG TGCCCAATGT GCTGGTACAG GCGGCAGAGC GCCTGCAAGA CGCACACGAC ACGCAACAGC ACTGGGCCCG TTGGGGCGGC TTTGCCGCGG GCTGGGTGCT GGCGTTCGGG CTGGGCTGGA GCCTGCATGC GACGGACGGC AAACAAACCA CACTGGCCAC GGCCCCCCCG CAACGGTTCG TGCAGCAGGC GGCCGTGGCG CACGCGGTCT ACCAACCCGA ACAGCGCCAT CCTGTGGAAG TGGCGGCCGC GCAGCAGGAC CACCTGGTGC AGTGGCTGTC CAAGCGGCTG GCGCGCCCGC TCACCGTGCC GCGGCTGCAG GCCGAGGGGT TCGAATTGAT GGGCGGGCGC CTGCTGCCCG GCGGCAGCGG GGCGCGCGCG CAATTCATGT ACCAGAACGC CGCGGGCGCG CGAATCACGC TGTACCTGGG CGCACTCGAC GGCCTACAGG CTGCGGCGGC ACCGACCACC GCGTTCCAGT TCCACGACGA AGGGACCGTG TCCAGTTTCT ACTGGGTGGA CCAGGGTTTT GGCTACGCCC TCAGCGGCGA ACTGCCGCGG CCCACGCTGC AGGCGCTGGC CACGGCGGTG TACCAGCAGA TCAGCGCAGC GCCGCCAGCG GGTGCGCGTG CGCCGGCCAA GGGCTCTTGA
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Protein sequence | MKPDPFSPSD ETHLHALADD RLPRAQAESL HSRMDSSQRQ RAEAWAQQRA QLQTLHADWL RQPVPNVLVQ AAERLQDAHD TQQHWARWGG FAAGWVLAFG LGWSLHATDG KQTTLATAPP QRFVQQAAVA HAVYQPEQRH PVEVAAAQQD HLVQWLSKRL ARPLTVPRLQ AEGFELMGGR LLPGGSGARA QFMYQNAAGA RITLYLGALD GLQAAAAPTT AFQFHDEGTV SSFYWVDQGF GYALSGELPR PTLQALATAV YQQISAAPPA GARAPAKGS
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