| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2546 |
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| Symbol | |
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| ID | 4671703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2709576 |
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| End bp | 2710778 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639839611 |
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| Product | phage integrase family protein |
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| Protein accession | YP_986780 |
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| Protein GI | 121594884 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.40023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00168033 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGACCG ATACCAAGCT GCGCAACCTC AAGCCGAAGG ACAAGCTCTA CAAGGTGAAT
GACCGTGACG GCCTCTATGT AGCCGTCACG GCCGCCGGAG CGATCTCGTT CCGCTACAAC
TACTCGATCC ACGGTAGGCA GGAGACCATC ACCTTCGGCC GCTACGGTGT CGGCGGCATC
ACCTTGGCGG AAGCCCGCGA GCGGTTGGGC GAGGCCAAGA AGATGATCGC GGCCGGGAAG
TCACCGGCCA AGGAAAAGGC GCGGGACAAG GCCCGCGTCA AGGACGCGGA GACGTTCGGG
GCCTGGGCGG AAAAGTGGCT GCGCGGCTAC CAGATGGCCG ACTCCACCCG CGACATGCGC
CGCTCGGTCT ACGAGCGCGA GCTGAAGCCG AAGTTCGGCA ATCAGAAGCT GGTAGAGATC
ACCCACGAAG ACCTGCGCGC GCTGACCGAT GCCATCGTCG AGCGCGGCGC GCCGGCGACG
GCCGTGCATG TCCGCGAGGT GGTGCTCCAG GTCTTTCGCT GGGCCATCGA GCGCGGACAG
AAGGTCGAGA ACCCGGCCGA GCTGGTGCGC CCGACGACCA TTGCCAAGTT CGAGCCGCGC
GACCGTGCGC TGACGCCCGA CGAGATCGGC CTGATGTACC AGTACATGGA GCGCATCGGC
ACAGCGCCAT CCATTCGGGC GGCGGCCAAG CTGCTGCTGT TGACGATGGT GCGCAAGAGC
GAGCTGACCA ACGCGACCTG GAGCGAGATC AATTTCAGCG ACGCGCTTTG GACGATCCCG
AAGGAGCGGA TGAAGCGGCG TAATCCGCAC CTGGTGTTCC TGTCCCGGCA GGCGCTGGAC
ATCTTCATTG CCCTGAAAAC CTTCGCGGGG GGATCGGACT ACGTGCTTCC GTCGCGGTAT
GACTCGGACT TACCCATGAG CAGCGCCACG CTCAACCAGG TGCTGACGCT GACGTATCGG
CTGGCGCAGA AAGAAGGGAA GTCGCTCGCC AAGTTCGGGC CGCATGACTT GCGGCGCACG
GCCAGCACGT TGCTGCATGA GGCCGGCTAC AACACGGACT GGATCGAGAA GTGCTTGGCG
CACGAACAGC GGGGCGTCAG GGCCGTCTAC AACAAGGCCG AGTACCGCGA GCAGCGCACG
GCGATGTTGC AGGACTGGGC GGACATGATC GACGAATGGA CGCTGAGACG GCCGAAGGCG
TAA
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| Protein sequence | MLTDTKLRNL KPKDKLYKVN DRDGLYVAVT AAGAISFRYN YSIHGRQETI TFGRYGVGGI
TLAEARERLG EAKKMIAAGK SPAKEKARDK ARVKDAETFG AWAEKWLRGY QMADSTRDMR
RSVYERELKP KFGNQKLVEI THEDLRALTD AIVERGAPAT AVHVREVVLQ VFRWAIERGQ
KVENPAELVR PTTIAKFEPR DRALTPDEIG LMYQYMERIG TAPSIRAAAK LLLLTMVRKS
ELTNATWSEI NFSDALWTIP KERMKRRNPH LVFLSRQALD IFIALKTFAG GSDYVLPSRY
DSDLPMSSAT LNQVLTLTYR LAQKEGKSLA KFGPHDLRRT ASTLLHEAGY NTDWIEKCLA
HEQRGVRAVY NKAEYREQRT AMLQDWADMI DEWTLRRPKA
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