Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2540 |
Symbol | |
ID | 4672240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2705121 |
End bp | 2705399 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639839605 |
Product | putative OriT-binding protein, TraK |
Protein accession | YP_986774 |
Protein GI | 121594878 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00967752 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.000154647 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGACGA CAGAAAGCAG CTACCCCGAG GAGCTGGCCG CACGGCTGGC TCTTCAGCAG AAGACCTCGC AAACAAAGCG CAGGGACTAC CTGGCCGCTT TCATGGCGGT GCGCTCGGAC GTGAAGGAAG CGATGGAGGC CGGCTACGCG CTCAAGATCA TCTGGGAGCA CCTGCGCGAG GTCGGGCGCA TCCCTTTCCG GTATGAGACG TTCCTGAAGT ACGTTCGCCA GCACATCACC AATGCGCGGC CTGGCTCCAT GGGGCAGGGT ACGAAGTAA
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Protein sequence | MATTESSYPE ELAARLALQQ KTSQTKRRDY LAAFMAVRSD VKEAMEAGYA LKIIWEHLRE VGRIPFRYET FLKYVRQHIT NARPGSMGQG TK
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