Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2524 |
Symbol | |
ID | 4673243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2687648 |
End bp | 2688691 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639839591 |
Product | Ku domain-containing protein |
Protein accession | YP_986760 |
Protein GI | 121594864 |
COG category | [S] Function unknown |
COG ID | [COG1273] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02772] Ku protein, prokaryotic |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00000225561 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCGATCTA AGCAACCGAC CGCGAGCGAC GCTCTGCCAT CTAACGCGAA GCAGGGGCAG GGCAAGGCCC CCACCTCGAC ACGCACCCTC TGGAAGGGGG CGATCAGCTT TGGCCTCGTC CATATTCCCG TGGGCTTGTA CTCGGCGACC GTCAGCTCGG GCATCGACTT TGACTGGCTG GACCGCCGGT CGATGGAGCC GGTGGGGTAC AAGCGTGTGA ACAAAATCAC GGGCAAGGAA ATCGCCACGG TCGATATCGT CAAGGGTGTG GAGTATGAAG AAGGCCGCTA CGTCATTCTG ACGCCCGAGG AAATCGCGGC CGCCTTTCCC AAGGTCACGC AGACGATCGA GATCGAGGCG TTTCTTGACG CCGACGAGAT CCCCTTTGTC TACCTGGAGC GTCCCTATTA CACGGCACCC CTCAAGCGTG GCGAAAAGGT GTACGCACTG CTGCGCGAGG CCCTGCGCCA GAGCAACCGC GTGGGCGTGG CCAAAGTGGT GATCCAGTCC AAGCAGCACC TGGCCGTGCT CATTCCGTGC GGCCGAGCGC TGATCCTCAA CCTGCTGCGC TGGGGAGGGG AGATCCGCTC ATTCGAGCAG CTGGCCCTGC CGCCGCTGGA TGCGAAAGCC GCGGGTATCA AGGACGCGGA GTTGGCCATG GCCATGCAGC TCATCGAGGA CATGACGCAG GAGTGGAACG CGGACCGCTT CCGCAATTCC TTCTCTGAGG AGATCCACAG GCTGGTCGAG GCCAAGGCCT CCGCGGGAGA GATTGCCCAT GTCGCTCAGC CGGATGAAGG ACCGGCGGTG GCTGCGGGGG CGGAGGTGCT GGACCTCACC GCGTTGCTCA AGCGCAGCCT GGAGGGCGCC TCGGCCACCC CGCCGCGCAA GGACAAACCC GCCTCCGTGA CCCGCCTTGC ACCGTCGGGC AAGGCAGCGG CCAAATCGAC CGCCGCCAAA AAGTCACCGG CCCGCAAGAC GGCGGCCAAG GCGGCGCCTG CCAAGCCCAC TGCGGCCAAG AAGCCTCGCC GCGCGCACGG ATAG
|
Protein sequence | MRSKQPTASD ALPSNAKQGQ GKAPTSTRTL WKGAISFGLV HIPVGLYSAT VSSGIDFDWL DRRSMEPVGY KRVNKITGKE IATVDIVKGV EYEEGRYVIL TPEEIAAAFP KVTQTIEIEA FLDADEIPFV YLERPYYTAP LKRGEKVYAL LREALRQSNR VGVAKVVIQS KQHLAVLIPC GRALILNLLR WGGEIRSFEQ LALPPLDAKA AGIKDAELAM AMQLIEDMTQ EWNADRFRNS FSEEIHRLVE AKASAGEIAH VAQPDEGPAV AAGAEVLDLT ALLKRSLEGA SATPPRKDKP ASVTRLAPSG KAAAKSTAAK KSPARKTAAK AAPAKPTAAK KPRRAHG
|
| |