Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2520 |
Symbol | |
ID | 4673585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2680417 |
End bp | 2682114 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639839587 |
Product | thiamine pyrophosphate protein |
Protein accession | YP_986756 |
Protein GI | 121594860 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00121235 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGCACA CCGCTACCTC CACCGCCGCA TCCCGCACGG GCGGGCAGAT CCTCGTCCAG CAGCTCATCG TGCACGGCGT GCAGCAGCTC TTTTGCGTGC CGGGCGAGAG CTACCTGGCC GTGCTGGACG CCCTGCACGA CGCCAACATC GCCGTCACCG TGTGCCGCCA GGAGGGCGGC GCGGCCATGA TGGCCGAGGC GCAGGGCAAG CTGACCGGCC GCCCGGGCAT CTGCTTCGTG ACGCGCGGGC CGGGGGTCAC CAACGCATCG GCGGGCATCC ACATCGCGCA CCAGGATTCG ACGCCGTTGA TCGTCTTCGT AGGCCAGGTG GCGCGCGGTG CGCTGGGGCG CGAGGCGTTC CAGGAGCTGG ACTACGGCGC CGTGTTCGGC ACCATGGCCA AGTGGGTGGT GCAGATCGAC GATGCGCGGC GCGTGCCGGA GCTGGTCTCG CGCGCATTCC ACGTCGCCAC CTCGGGCCGC CCCGGCCCCG TGGTGGTGGC CCTGCCCGAG GACATGCTGA CCGATGCCGT GCAGGTGGCC GATGCCCTGC CCTACTCCGT GCCCGAGACC TACCCCGGCG CGCCCGCACT GCAGGCACTG GCGGCGCGGC TGCAGGCGGC CGAGCGGCCG GTGGTCATCG TGGGCGGCAG CCGCTGGTCC GACCAGGCGG TGCGCGACAT GCAGGCCTTT GCCAGCGCCT GGCGGCTGCC GGTGTATTGC TCGTTCCGCC GGCAGATGCT GTTCCCGGCC AACCACGCCA GCTACGCGGG CGACCTGGGC CTGGGCGTCA ACCCCCAACT GCTGGCGCGC ATCCGCGCGA GCGACCTGGT GCTGGTGCTG GGCGGGCGGC TGTCGGAGAT CCCCTCGCAG GGCTACGAGC TGTTCGACAT TCCCGTGCCG GCGCAGCCGC TGGTGCATGT GCATGCGGAT GCCGACGAAC TTGGCAAACT CTACCGCCCG GTGCAGGCCA TCCACGCCAC GCCGCAGGCC ATGGCCGCCG CCCTGGCCAG CCTGCGCCCC GCGGCCGAGC CGCGCTGGAC CGCGCACACC GAGGCTGCGC GCGCCGAGTA CCTGGCCTGG AGCGACCCGG CGCCCATCCG CATCCCCGGC AAGCTGCAGA TGGGCGAGGT GATGCAGCAC CTGCGCGCGG TGCTGCCCGC CAACACCATC TTCTGCAACG GCGCGGGCAA CTTCGCCACC TGGGTGCACC GCTTCTGGCC GTTCACCACC TATGCGAGCC AACTGGCCCC CACCAGCGGC TCGATGGGCT ACGGCCTGCC GGCCGGCGTG GGCGCCAAGC GCCTGTGGCG CGAGCGCGAG GTGGTGGTGT TTGCGGGCGA CGGCGACTTT CTGATGCACG GCCAGGAGTT CGCCACCGCC GTGCAGTACG GCCTGCCGCT GATAGTGGTG CTGTTGGACA ACGCCATGTA CGGCACCATC CGCATGCACC AGGAGCGCGA GTACCCCGGG CGCATTAGCG CCACACAGCT CAAGAACCCC GATTTCAAGG CCTATGCCCA GGCCTTCGGC GGGCACGGCG AGCGCGTGGA GCGCACCGAA GACTTCGCCC CGGCACTGGC ACGCGCACGG GCGAGCGGGC TGCCCAGCGT GCTGCACTGC CTGATCGATC CGCAGGCGAT CACACCCACG GGAACGCTGG ATGGCATCCG GTCGGCGGCA ATGGCGCGCA AGGGGTGA
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Protein sequence | MPHTATSTAA SRTGGQILVQ QLIVHGVQQL FCVPGESYLA VLDALHDANI AVTVCRQEGG AAMMAEAQGK LTGRPGICFV TRGPGVTNAS AGIHIAHQDS TPLIVFVGQV ARGALGREAF QELDYGAVFG TMAKWVVQID DARRVPELVS RAFHVATSGR PGPVVVALPE DMLTDAVQVA DALPYSVPET YPGAPALQAL AARLQAAERP VVIVGGSRWS DQAVRDMQAF ASAWRLPVYC SFRRQMLFPA NHASYAGDLG LGVNPQLLAR IRASDLVLVL GGRLSEIPSQ GYELFDIPVP AQPLVHVHAD ADELGKLYRP VQAIHATPQA MAAALASLRP AAEPRWTAHT EAARAEYLAW SDPAPIRIPG KLQMGEVMQH LRAVLPANTI FCNGAGNFAT WVHRFWPFTT YASQLAPTSG SMGYGLPAGV GAKRLWRERE VVVFAGDGDF LMHGQEFATA VQYGLPLIVV LLDNAMYGTI RMHQEREYPG RISATQLKNP DFKAYAQAFG GHGERVERTE DFAPALARAR ASGLPSVLHC LIDPQAITPT GTLDGIRSAA MARKG
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