| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2510 |
|---|
| Symbol | |
|---|
| ID | 4674447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2672217 |
|---|
| End bp | 2673176 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639839577 |
|---|
| Product | GTP-binding protein, HSR1-related |
|---|
| Protein accession | YP_986746 |
|---|
| Protein GI | 121594850 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1161] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.271003 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0153931 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATCC AGTGGTTTCC CGGTCACATG CACCTGACGC GCAAGGCGAT CGGCGAGCGC
ATCAAGGACA TCGATGTGGT GATCGAGCTG CTGGACGCGC GCTTGCCGGG CTCCAGCAGC
AATCCGCTAC TGGCCGAGTT GACGGGCCAT AAGCCTGCGC TGAAGGTGCT CAACAAGCAG
GACGTGGCCG ACCCGGCGCG CACGCCGGCG TGGCTGGCCT GGTACAACGC GCGGCCCGGC
ACGAGCGCGA TTGCGCTGGA TGCGTCCGAC GCCGCGCCCG CGCGCCGGCT CATCGACGCG
TGCCGGCAGC TTGCGCCCAA CCGGCGCGGC CTCTCCAAGC CCATGCGGGT ACTGATCTGC
GGCATTCCCA ACGTGGGCAA GTCCACGCTG ATCAACACCT TGTCCGCCAA GCGCGAAGCC
AAGACGGGCG ACGAGGCCGG CGTGACCAAG CAGGAGCAAC GCATCGTGCT GGACGATGAC
TTTTACCTGT GGGACACGCC CGGCATGCTG TGGCCGCGCA TCACCGTGCC CGAAAGCGGC
TACAAGCTCG CCGCCAGCGG CGCCGTGGGC CGCAATGCGT ACGACGAGGA AGAAGTGGCG
CTGGAACTGT TGGCCTACCT CAAGCAGCAC TACGCACCGC TGCTGGACGC GCGCTACAAG
CTGGGGCTGG ACGCGGCGGC CATCGCCGCC AAGCACGATG ATGAGCTGCT GGAGCTGATT
GCCAGGAAGC GCGGCGCGGT GATGAGCGGC GGGCGCCTCA ACCTGCAAAA GGCCGCCGAG
ATCGTGCTCA CCGACCTGCG CAGCGCAGCG CTGGGCCGTG TGACGCTGGA GACGCCGGCC
GAGTTCGAGG CCTGGCTGGC CGCCGCCGAG GTGCAGGAAA AGGAACGCGC CGCGCGCAAG
GCCGAGCAGC TGCGCCGCAA CGAGCGCCGC GCGCGCAACG CCCCGCGGGA CGAGGACTGA
|
|---|
| Protein sequence | MAIQWFPGHM HLTRKAIGER IKDIDVVIEL LDARLPGSSS NPLLAELTGH KPALKVLNKQ
DVADPARTPA WLAWYNARPG TSAIALDASD AAPARRLIDA CRQLAPNRRG LSKPMRVLIC
GIPNVGKSTL INTLSAKREA KTGDEAGVTK QEQRIVLDDD FYLWDTPGML WPRITVPESG
YKLAASGAVG RNAYDEEEVA LELLAYLKQH YAPLLDARYK LGLDAAAIAA KHDDELLELI
ARKRGAVMSG GRLNLQKAAE IVLTDLRSAA LGRVTLETPA EFEAWLAAAE VQEKERAARK
AEQLRRNERR ARNAPRDED
|
|---|
| |