Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2481 |
Symbol | |
ID | 4672876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2643299 |
End bp | 2645122 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639839549 |
Product | hypothetical protein |
Protein accession | YP_986718 |
Protein GI | 121594822 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00277144 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCCAAC CGCCCGCCGC CACAGGTTCC CGGCTGCTTG ACCTGCCACT GGAGCGCACG CTGCACGCCT GGGTACAGCG CTTTGGCGAG CCGCGCTGGC GCGGCTGCCA CGTGGAAGGC TGGGTGTTCG AAAGCCAGGC CGCGCGCCTT GCTGCGGCGC AGCAGCTGGC AGCCGCAGGC GTGCATGCCC GCTTTCACAG TGCCTACAAG CCGCTGGTAC AGCATTTCAT GGACCACGTG GATTGCACCC AGGTGGTGCA GGCCCGCGTG CGCTACCCGC TGGCGGCGCA CGGGCCTGCA CAGCGCTTTC GGTTGGAGGC CTATCCGCTC GCCGCCCTGC TGGGGGGCGG CATCTTGCAC ATGGAGCCCC ACGACGACGC CAGTGGCGGC TACCACGTGG AACTGGAACT GCGCGACGGC ACCCGCACCG CGCAGCACGT GCACGCACCC AACCGCGTAC ACACCGACAT GACGGGCGCC ACGGTGCTCT CGCCCACCGG CTGGCTGCGC GTGGGCACAC AGGAAGGCGC TACCGACCTG ATCGACACCG CCGTATGCAC CGACTACGAG CAGGCTTTCG CCGCGGCGGT GCAGGCGGTG CGCAGTCACG CGTGGCCGGA CCATGAGCCG TACTTCGACC GCCTGCTGCT GCGCGTGGAC CTGCCGGGCT ACGAGCAGCC CGTGGGCGCC ACCGGCGAGA CCATAAGCAC CCTGGAGGCG CTGCACGAGG ACCTGTACTT CACGCTGCTG GAGTTCTTCC AACAGCACAG CGGCCGCCCC GTGGGCGACC GCCGGTTGCA GCCCGGGCAG ATCGTGCCCG ACGTGCGCGC GGGCGACGGC GCTCCGCACG TACAGGTGGA CCTGCTGCCC TTCGCGGCGT GCGCCGACGA CCTGCCAGCC CACCCAACGG CCCACGCCCC GGACAGTTTG GCGACGCTGG CCGAGTCCCC TGCCCCTGAT CGCATCACCC AGACCCTGCA CGCCTGGCCC GCGCAACGTT TCAGTGCCCG GTCACGCCAG GGACGCACCG TATGGGGGCA GTACCACGCG GGCACGCAGG CACCGGTGTT CATCAGTGCG GGCCAGCATG CCAACGAGAC ATCGGGCATC GTGGGCGCGT TGCGCGCCGC CGAAGTGCTG CAGGCGCAAC CCGGCGCGCA CTTCGCGCTG ATCGCGCTGG AGAACCCCGA CGGCTACGCT CTGCACCGCG CGCTGTGCGC CCGCCACCCG GGCCACATGC ACCATGCCGC GCGCTACACC GCGCTGGGCG ACGATGTGGA ATACCGCGAC CACGCGCCGC TCTACGAGCG CGAGGCCCGC CAGACCGCGC TGGCGCTGTC GGGCGCGCAA CTGCATGTGA ACCTGCATGG CTACCCCGCG CATGAGTGGA CGCGACCGCT GTCGGGCTAT GTGCCGCATG GATTCGAGCA GTGGATGCTG CCCAAGGGGT TCTTCCTCAT CCTGCGCTAC CACGCCGGGT GGCAGCAGCC CGCGCGTGCG CTGCTGGAGG CCGTGTGCGC GCGCCTGCAG CAGGTGCAGG GGCTGGCAGA TTTCAACGCA CGCCAGCGGG CCCTCTACGA GTACCACGCA GGCCCGCTGC CCTTCGAGGT GCTGGATGGC GTCGCCTGCA TGCAGTCGCA GACGTCGCAC GATGCGCCGG TGACGCTGAT CACCGAGTTC CCCGACGAGA CGGTGCACGG CGACGCCTTC CGCTTTGCGC ACACGGTGCA GATGCACACC GCCCTGGCCG CCGTGCAGGC CTGGCAGGAC ATTGCCACGC ATCTGCCATC GCCCGTCGGC ACTTCAAGCC AAACAGGCCT CTAG
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Protein sequence | MTQPPAATGS RLLDLPLERT LHAWVQRFGE PRWRGCHVEG WVFESQAARL AAAQQLAAAG VHARFHSAYK PLVQHFMDHV DCTQVVQARV RYPLAAHGPA QRFRLEAYPL AALLGGGILH MEPHDDASGG YHVELELRDG TRTAQHVHAP NRVHTDMTGA TVLSPTGWLR VGTQEGATDL IDTAVCTDYE QAFAAAVQAV RSHAWPDHEP YFDRLLLRVD LPGYEQPVGA TGETISTLEA LHEDLYFTLL EFFQQHSGRP VGDRRLQPGQ IVPDVRAGDG APHVQVDLLP FAACADDLPA HPTAHAPDSL ATLAESPAPD RITQTLHAWP AQRFSARSRQ GRTVWGQYHA GTQAPVFISA GQHANETSGI VGALRAAEVL QAQPGAHFAL IALENPDGYA LHRALCARHP GHMHHAARYT ALGDDVEYRD HAPLYEREAR QTALALSGAQ LHVNLHGYPA HEWTRPLSGY VPHGFEQWML PKGFFLILRY HAGWQQPARA LLEAVCARLQ QVQGLADFNA RQRALYEYHA GPLPFEVLDG VACMQSQTSH DAPVTLITEF PDETVHGDAF RFAHTVQMHT ALAAVQAWQD IATHLPSPVG TSSQTGL
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