Gene Ajs_2481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2481 
Symbol 
ID4672876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2643299 
End bp2645122 
Gene Length1824 bp 
Protein Length607 aa 
Translation table11 
GC content70% 
IMG OID639839549 
Producthypothetical protein 
Protein accessionYP_986718 
Protein GI121594822 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00277144 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCCAAC CGCCCGCCGC CACAGGTTCC CGGCTGCTTG ACCTGCCACT GGAGCGCACG 
CTGCACGCCT GGGTACAGCG CTTTGGCGAG CCGCGCTGGC GCGGCTGCCA CGTGGAAGGC
TGGGTGTTCG AAAGCCAGGC CGCGCGCCTT GCTGCGGCGC AGCAGCTGGC AGCCGCAGGC
GTGCATGCCC GCTTTCACAG TGCCTACAAG CCGCTGGTAC AGCATTTCAT GGACCACGTG
GATTGCACCC AGGTGGTGCA GGCCCGCGTG CGCTACCCGC TGGCGGCGCA CGGGCCTGCA
CAGCGCTTTC GGTTGGAGGC CTATCCGCTC GCCGCCCTGC TGGGGGGCGG CATCTTGCAC
ATGGAGCCCC ACGACGACGC CAGTGGCGGC TACCACGTGG AACTGGAACT GCGCGACGGC
ACCCGCACCG CGCAGCACGT GCACGCACCC AACCGCGTAC ACACCGACAT GACGGGCGCC
ACGGTGCTCT CGCCCACCGG CTGGCTGCGC GTGGGCACAC AGGAAGGCGC TACCGACCTG
ATCGACACCG CCGTATGCAC CGACTACGAG CAGGCTTTCG CCGCGGCGGT GCAGGCGGTG
CGCAGTCACG CGTGGCCGGA CCATGAGCCG TACTTCGACC GCCTGCTGCT GCGCGTGGAC
CTGCCGGGCT ACGAGCAGCC CGTGGGCGCC ACCGGCGAGA CCATAAGCAC CCTGGAGGCG
CTGCACGAGG ACCTGTACTT CACGCTGCTG GAGTTCTTCC AACAGCACAG CGGCCGCCCC
GTGGGCGACC GCCGGTTGCA GCCCGGGCAG ATCGTGCCCG ACGTGCGCGC GGGCGACGGC
GCTCCGCACG TACAGGTGGA CCTGCTGCCC TTCGCGGCGT GCGCCGACGA CCTGCCAGCC
CACCCAACGG CCCACGCCCC GGACAGTTTG GCGACGCTGG CCGAGTCCCC TGCCCCTGAT
CGCATCACCC AGACCCTGCA CGCCTGGCCC GCGCAACGTT TCAGTGCCCG GTCACGCCAG
GGACGCACCG TATGGGGGCA GTACCACGCG GGCACGCAGG CACCGGTGTT CATCAGTGCG
GGCCAGCATG CCAACGAGAC ATCGGGCATC GTGGGCGCGT TGCGCGCCGC CGAAGTGCTG
CAGGCGCAAC CCGGCGCGCA CTTCGCGCTG ATCGCGCTGG AGAACCCCGA CGGCTACGCT
CTGCACCGCG CGCTGTGCGC CCGCCACCCG GGCCACATGC ACCATGCCGC GCGCTACACC
GCGCTGGGCG ACGATGTGGA ATACCGCGAC CACGCGCCGC TCTACGAGCG CGAGGCCCGC
CAGACCGCGC TGGCGCTGTC GGGCGCGCAA CTGCATGTGA ACCTGCATGG CTACCCCGCG
CATGAGTGGA CGCGACCGCT GTCGGGCTAT GTGCCGCATG GATTCGAGCA GTGGATGCTG
CCCAAGGGGT TCTTCCTCAT CCTGCGCTAC CACGCCGGGT GGCAGCAGCC CGCGCGTGCG
CTGCTGGAGG CCGTGTGCGC GCGCCTGCAG CAGGTGCAGG GGCTGGCAGA TTTCAACGCA
CGCCAGCGGG CCCTCTACGA GTACCACGCA GGCCCGCTGC CCTTCGAGGT GCTGGATGGC
GTCGCCTGCA TGCAGTCGCA GACGTCGCAC GATGCGCCGG TGACGCTGAT CACCGAGTTC
CCCGACGAGA CGGTGCACGG CGACGCCTTC CGCTTTGCGC ACACGGTGCA GATGCACACC
GCCCTGGCCG CCGTGCAGGC CTGGCAGGAC ATTGCCACGC ATCTGCCATC GCCCGTCGGC
ACTTCAAGCC AAACAGGCCT CTAG
 
Protein sequence
MTQPPAATGS RLLDLPLERT LHAWVQRFGE PRWRGCHVEG WVFESQAARL AAAQQLAAAG 
VHARFHSAYK PLVQHFMDHV DCTQVVQARV RYPLAAHGPA QRFRLEAYPL AALLGGGILH
MEPHDDASGG YHVELELRDG TRTAQHVHAP NRVHTDMTGA TVLSPTGWLR VGTQEGATDL
IDTAVCTDYE QAFAAAVQAV RSHAWPDHEP YFDRLLLRVD LPGYEQPVGA TGETISTLEA
LHEDLYFTLL EFFQQHSGRP VGDRRLQPGQ IVPDVRAGDG APHVQVDLLP FAACADDLPA
HPTAHAPDSL ATLAESPAPD RITQTLHAWP AQRFSARSRQ GRTVWGQYHA GTQAPVFISA
GQHANETSGI VGALRAAEVL QAQPGAHFAL IALENPDGYA LHRALCARHP GHMHHAARYT
ALGDDVEYRD HAPLYEREAR QTALALSGAQ LHVNLHGYPA HEWTRPLSGY VPHGFEQWML
PKGFFLILRY HAGWQQPARA LLEAVCARLQ QVQGLADFNA RQRALYEYHA GPLPFEVLDG
VACMQSQTSH DAPVTLITEF PDETVHGDAF RFAHTVQMHT ALAAVQAWQD IATHLPSPVG
TSSQTGL