Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2472 |
Symbol | |
ID | 4672234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2631584 |
End bp | 2632741 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639839540 |
Product | tetratricopeptide repeat protein |
Protein accession | YP_986709 |
Protein GI | 121594813 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.251188 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.3368 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTTG ACCTGAGCTG GATCTTCCTG GGGCTGCCGC TGGCCTTCGG GCTGGGGTGG TTCGCCTCGC GTTTCGACCT GCGGCAGATG CGCGAGGAGA ACCGCCGCGC ACCCAAGGCT TACTTCAAGG GCCTGAACTA CCTTCTCAAC GAGCAGCAAG ACCAGGCCAT CGATGCCTTC ATCGAGGCGG TGCAGAACGA CCCTGACACC ACCGAACTGC ACTTCGCCCT GGGCAACCTG TTTCGCCGCC GCGGCGAGTA CAACCGCGCC GTGCGGGTGC ACGAGCACCT GCTGTCGCGC GGCGACCTGA GCCGCGCCGA CCGCGAGCGC GCACAGCATG CGCTGGCGCT GGACTTCCTC AAGGCAGGCC TGCTCGACCG CGCGGAAGAC GCACTGCGCC GCCTGGAGGG CAGCGCCTTC GAGGGCCAGG CACGCATGGC CCTGCTGGCC ATTTACGAGC GTTCGCGCGA CTGGCCACAG GCGTCGGACA TTGCACGGCG CATGCACCAT GCGCAGCAGG GCGACTTCAG CACCCGGCTG GCGCACTACC TGTGCGAGCA GGCGCTGGCG CTGGCAGCCC ATGGCGAACT GCCCGCCGCC CAGGCGCTGC TGGAGCAGGC CCTGGCCACG GCGCCCCAGG CGCCGCGCGC GCGCATCGAG CTGGCGCGGC TGCAGCAGCG CCAGGGCCAG CCCGAAGCGG CCTTCGACAC CCTGCAAGCG CTCGCCCAGG CCGCACCCGC CGCGCTGCCG CTGGCCGCAC CGCTGCTGGT GGAGACCGCC ACCGCCACGG GACAAGCGCC GCAGGCCCAG GCGCTGCTGC AGCACCACTA CGAGGACATG CCATCCCTGG ATCTGCTGGA AGCCGTGGTG GCGCTGGAGG CTGCCAACGC GAACACTGCG GCCGTTGGGC GCGAGTGGTA CGTGCGCCAC CTGGAGCGCG AGCCCTCCCT GGTCGCCGCG ACGAAGTGGC TGGCAGGCGA GACGCTGACC CATGAGCAGT TCCACCCGCA GATCCAGCGC GCGCTGGAGC AGGCGGCAAA GCCGCTCACG CGCTACCGCT GCGCAGCCTG CGGGTTCGAG GCACGCCAGC ACTTCTGGCA ATGCCCGGGC TGCCAGACCT GGGACAGTTA TCCGGCACGG CGCGTCGAGG AGCTGTAG
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Protein sequence | MEFDLSWIFL GLPLAFGLGW FASRFDLRQM REENRRAPKA YFKGLNYLLN EQQDQAIDAF IEAVQNDPDT TELHFALGNL FRRRGEYNRA VRVHEHLLSR GDLSRADRER AQHALALDFL KAGLLDRAED ALRRLEGSAF EGQARMALLA IYERSRDWPQ ASDIARRMHH AQQGDFSTRL AHYLCEQALA LAAHGELPAA QALLEQALAT APQAPRARIE LARLQQRQGQ PEAAFDTLQA LAQAAPAALP LAAPLLVETA TATGQAPQAQ ALLQHHYEDM PSLDLLEAVV ALEAANANTA AVGREWYVRH LEREPSLVAA TKWLAGETLT HEQFHPQIQR ALEQAAKPLT RYRCAACGFE ARQHFWQCPG CQTWDSYPAR RVEEL
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