Gene Ajs_2440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2440 
Symbol 
ID4671530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2594959 
End bp2595657 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content63% 
IMG OID639839508 
Productnegative transcriptional regulator 
Protein accessionYP_986677 
Protein GI121594781 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0623285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.532082 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCTAC CTGCACAATT CGCCGAGTCC CGGCTCGGGG AGCTTCACCG CATCGTCCGC 
GAGAACGCGC TGGGCATGCT GGTGACACAC ACTTCCGCCG GTTTGGAGGC CAACCACCTT
CCATTTTTTC TGGATGGCGA CATGCTGCTG GCGCATGTGG CGCGTGCCAA TCCCATCTGG
CGGGAGGTAC GCGACGGCAA TCAAGTGCTT GTCGTCTTCC GCGGCGTCGA AGGTTATATC
TCTCCCAACT GGTATCCCGG TAAACAGGAG ACGCATCGGC GCGTGCCTAC CTGGAACTAC
GAGGTTGTCC ATGCCCACGG AACGATTCAT GTCCGCGACG ATGTGAAATT CGTTCGCAGG
GTGGTCGCCT TGCTAACGCG CCAGCATGAG GCGGGGCAGG CACAGCCGTG GAAGATGGGC
GATGCGCCCA CAGACTACCT GGATGAGCAA CTGCGGCATA TCGTGGGCAT CGAGATCCGT
CTCGGGCGAC TGGAAGGAAA GCGCAAGCTG AACCAGCACC ACGGCGAGCA AGACCGCGAG
GGCGCGATTC AAGGACTGGA GTCCCGCGGC AACCATGGGC TCGCCAAAGC CATGAGGGAC
GCGACGTCCC CACATCGTGA CCTGCAACTC CTTGGCCGGC CGGCTTGCGG CCATGCGCGG
AGCGGTGTGG CGGGCCTCAG TGCGTTGCCT GCCAGGTGA
 
Protein sequence
MYLPAQFAES RLGELHRIVR ENALGMLVTH TSAGLEANHL PFFLDGDMLL AHVARANPIW 
REVRDGNQVL VVFRGVEGYI SPNWYPGKQE THRRVPTWNY EVVHAHGTIH VRDDVKFVRR
VVALLTRQHE AGQAQPWKMG DAPTDYLDEQ LRHIVGIEIR LGRLEGKRKL NQHHGEQDRE
GAIQGLESRG NHGLAKAMRD ATSPHRDLQL LGRPACGHAR SGVAGLSALP AR