Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2440 |
Symbol | |
ID | 4671530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2594959 |
End bp | 2595657 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639839508 |
Product | negative transcriptional regulator |
Protein accession | YP_986677 |
Protein GI | 121594781 |
COG category | [K] Transcription |
COG ID | [COG2808] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0623285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.532082 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCTAC CTGCACAATT CGCCGAGTCC CGGCTCGGGG AGCTTCACCG CATCGTCCGC GAGAACGCGC TGGGCATGCT GGTGACACAC ACTTCCGCCG GTTTGGAGGC CAACCACCTT CCATTTTTTC TGGATGGCGA CATGCTGCTG GCGCATGTGG CGCGTGCCAA TCCCATCTGG CGGGAGGTAC GCGACGGCAA TCAAGTGCTT GTCGTCTTCC GCGGCGTCGA AGGTTATATC TCTCCCAACT GGTATCCCGG TAAACAGGAG ACGCATCGGC GCGTGCCTAC CTGGAACTAC GAGGTTGTCC ATGCCCACGG AACGATTCAT GTCCGCGACG ATGTGAAATT CGTTCGCAGG GTGGTCGCCT TGCTAACGCG CCAGCATGAG GCGGGGCAGG CACAGCCGTG GAAGATGGGC GATGCGCCCA CAGACTACCT GGATGAGCAA CTGCGGCATA TCGTGGGCAT CGAGATCCGT CTCGGGCGAC TGGAAGGAAA GCGCAAGCTG AACCAGCACC ACGGCGAGCA AGACCGCGAG GGCGCGATTC AAGGACTGGA GTCCCGCGGC AACCATGGGC TCGCCAAAGC CATGAGGGAC GCGACGTCCC CACATCGTGA CCTGCAACTC CTTGGCCGGC CGGCTTGCGG CCATGCGCGG AGCGGTGTGG CGGGCCTCAG TGCGTTGCCT GCCAGGTGA
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Protein sequence | MYLPAQFAES RLGELHRIVR ENALGMLVTH TSAGLEANHL PFFLDGDMLL AHVARANPIW REVRDGNQVL VVFRGVEGYI SPNWYPGKQE THRRVPTWNY EVVHAHGTIH VRDDVKFVRR VVALLTRQHE AGQAQPWKMG DAPTDYLDEQ LRHIVGIEIR LGRLEGKRKL NQHHGEQDRE GAIQGLESRG NHGLAKAMRD ATSPHRDLQL LGRPACGHAR SGVAGLSALP AR
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