| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2420 |
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| Symbol | |
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| ID | 4671367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2568027 |
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| End bp | 2571602 |
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| Gene Length | 3576 bp |
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| Protein Length | 1191 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639839488 |
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| Product | delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase |
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| Protein accession | YP_986657 |
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| Protein GI | 121594761 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.340967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.812309 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAGG ACATCCAGGC GCGTGCCCTG CGCCTGGCGC AAGGGCTGCG CCAGCGCGAA
CATGCCAGCG GCCGGTCCGG CCTGGTACAG GGGCTGCTGC AGCGGTTCGC GCTGTCCTCG
CAAGAAGGCG TGGCGCTGAT GTGCCTGGCC GAAGCGCTGC TGCGCATTCC CGACGCGGCC
ACGCGCGACG CGCTGATCCG CGACAAGATC GGTACGGGCG ACTGGGCCGC GCACCTGGGC
AAGAGCCCGT CACTGTTCGT CAATGCGGCC ACCTGGGGCC TGCTGCTCAC CGGACGGCTG
GTGACCACAC ACAGCGAAGG GGGCTTGAAG GATGCGCTGC GCCGCATCAC CGCACGCGGG
GGAGAGCCGC TGATCCGCAA GGGTGTGGAC GTCGCCATGC GCATGATGGG CGAGCAGTTC
GTCACCGGCG AGACCATCGA ACAGGCGCTG GGCAAGGCGC GCACCCTGGA GGCACGGGGC
TTTCGCTATT CCTACGACAT GCTGGGCGAG GCCGCGCTCA CGGGGCACGA CGCCGATCGC
TACATGCAGT CCTATGTGGA TGCCATCCAC GCCATCGGCC GCGCCAGCGC GGGCCGCGGC
GTGTACGAAG GGCCCGGCAT TTCCATCAAG CTCAGCGCGC TGCACCCGCG CTACGCCCGC
GCGCAGTGGC AGCGCGTGAT GGACGAGCTG TACCCGCGCG TGCTGCAACT GGCGGAACTG
GCGCGCGGCT ATGACATCGG CCTGAACATC GACGCCGAAG AGGCCGACCG GCTGGAACTG
TCGCTGGACC TGCTGGAGCG CCTTTGCCAT GCGCCGTCCC TCGCGGGCTT CAAGGGCATC
GGCTTCGTGA TCCAGGCCTA CCAAAAGCGC TGCCCGCGCG TGATCGACTA CTGCATCGAT
CTGGCGCGCC GCAGCGGCCA CCGCCTGATG ATCCGGCTGG TCAAGGGCGC GTACTGGGAC
AGCGAGATCA AGCGCGCCCA GGTCGATGGC CTGGCGGACT ACCCCGTGTA CACGCGCAAG
GCGCACACCG ATATTTCCTA CATCGCCTGC GCACGCAAGC TGCTGGGCGC ACCCGACGCG
GTGTACCCCC AGTTCGCCAC GCACAACGCG CAGACGCTGG CCACCATCTA TGAGCTGGCG
GGCCCCGCGG ACTATCGCCC CGGCCAGTAC GAGTTCCAGT GCCTGCACGG CATGGGCGAG
CCGCTGTACG AGCAGGTGGT GCCCGAGCGC CCCTGCCGCA TCTACGCCCC GGTGGGTACG
CATGAAACGC TGCTGGCGTA CCTGGTGCGC CGCCTGCTGG AAAACGGCGC CAACACCTCG
TTCGTGAACC GCGTGGCCGA CGCCACGCTG CCGCTGGAGG CGCTGATCGA CAACCCCGTG
GACACGGTGG ATGCCGAGGC CCGCGCCGAA GGCGGCGCCG GCCTGCCGCA CCCGCGCATC
GCGCTGCCCC CGCAGCTCTA CGGCCCGGCG CGTGCCAATT CGCAGGGCCT GGACCTGGCG
GCCGAGCCCA CGCTGCAGTG CGTGGCCGAC GCGCTGGCCG CCAGCGCCGC CACGCCGCTG
GAAGCCACAC CCCTCATCGC CGCCGGCGCT CCCGCCGGCC CGCGCGTCCC CGTGCGCAAC
CCTGCCGATG CCACCGATAT GGTCGGGCAG GTGCAAGAAG CCACCACCGC CGATGTGGAC
GCCGCGCTGC GGGCTGCCGC CGCGGCGCAG CCCGCCTGGG CTGCCACGCC ACCCGCAGAA
CGTGCACGGC TGCTGCGCGC TGCGGCCGAT GGGCTGGAAC GCGATATGCC TGCCCTGCTG
GCCCTGCTGA TGCGCGAAGC CGGCAAGACC TGCGCCAACG CCGTGGCCGA GGTGCGCGAG
GCGGTGGACT TCCTGCGCTA TTACGCGGCG CAGGTGGATG GGCACTTCGA CAACGCCACC
CACCCGCCGC TGGGGCCGGT CACCTGCATC AGCCCCTGGA ACTTCCCGCT GGCCATCTTC
ATGGGCCAGG TGGCCGCCGC ACTGGCCGCA GGCAATGTAG TGCTGGCCAA GCCGGCAGAA
CAAACGCCCC TCATTGCCTG CCAGGCCGTG CGCCTGCTGC ACCAGGCCGG CGTGCCTGCC
GCCGCCGTGC AACTGCTGCC CGGCAGCGGC GAGACGGTGG GCGCGGCGCT GGTGGGCGAC
GCGCGCGTGA TGGGCGTGAT GTTCACCGGC TCCACCGAGG TGGCGCGGCT GCTGCAGCGC
AGCCTGGCCG CACGGCTGGA CGCCAGCGGC CGGCCCATTC CGCTGATTGC GGAGACAGGC
GGGCAAAACG CCATGGTCGT GGACTCCTCC GCCCTGCTGG AGCAGGTGGT CGCGGACGTG
CTCACCTCGG CCTTCGACAG CGCGGGCCAG CGCTGCTCCG CCCTGCGCGT GCTGTGCGTG
CAGCGCGACT GCGCGGACCG CCTGCTGCAG ATGCTGCGCG GCGCCATGCA GGAACTGCAC
ATGGGCAACC CCACGCAACT GGCGGTGGAC GTAGGCCCGG TGATCGACGA GGAGGCGCGC
GCCACGATCG CGCGCCACAT CGAGCGCCTG CGCGCCAGCG GCCGGCCGGT GTTCCAAAGC
CATGCCGGTG GGCAGGGCAC GGCGCATGGC ACCTTCGTGC CGCCCACGCT GATCGAGCTG
AACAGCATCA CCGAGCTGGA GCGCGAGGTC TTCGGCCCCG TGCTGCACGT GGTGCGCTAC
GAGCGCGACG AGCTGGACAC GCTGCTCGCG CAGATCAGCG CCACGGGCTA CGGCCTCACC
CAGGGCCTGC ACACCCGCAT CGACGAAACC GTGGCCCAGG TGCTGGCCCA CAGCACGGCC
GGCAACGTCT ATGTGAACCG CAACATGGTG GGCGCCGTGG TCGGCGTGCA GCCTTTCGGC
GGCGAGGGCC TGTCGGGCAC GGGCCCCAAG GCAGGCGGCC CGCTGTATCT GCTGCGCCTG
CTGTCGCGCC ACCCGGCCAA CGCCACGCAC GGCGCGCTGG CGGCGACGGC CGTGCAGGTG
CCCGACGCCA GCGCACAGCC CGCGCTGCTC GCCCCGCTGT CGGCGCTGGA GCACTGGGCC
CAGGCGCAAG GCAACGCAGC GCTGGCACAG GCCTGCGCGG CCCAGGCGCA GGCCAGTTGC
GCGGGCCTGG CCTGCACCCT GCCCGGCCCC ACCGGCGAGC GCAACACCTA TCGGCTGCTG
CCGCGCGAAC GCGTGCTGTG CCTGGCCGAT ACGGACGAGG CGCTGCTGCT GCAGTTGAGC
GCGGTGCTGG CCGCGGGCGC GCTTGCGCTC TGGCCGCAGG ACGCGCAGGC CCTGTGCGCC
ACGCTGCCGA GCGAGGTGCA GGCGCGCATC GCCCTGGTGT CCGACTGGCG CGGCGATGGC
CTGGGCTACG ACGCCGTGCT GCACAGCGGC AGCCCGGAAA CGCGCCGCGT GGAATGCCAG
CGCGTGGCCC TGCGCCCCGG CCCCATCGTG GGCGTGACGG CGATGGACGG CGCCGCCGAT
GCGCTGCAGG CGCCCCTGCG CCTGTTGCTG GAGCGCGCGG TCAGCATCAA CACCACGGCG
GCAGGCGGCA ATGCCAGCCT GATGACCATG GCGTGA
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| Protein sequence | MAQDIQARAL RLAQGLRQRE HASGRSGLVQ GLLQRFALSS QEGVALMCLA EALLRIPDAA
TRDALIRDKI GTGDWAAHLG KSPSLFVNAA TWGLLLTGRL VTTHSEGGLK DALRRITARG
GEPLIRKGVD VAMRMMGEQF VTGETIEQAL GKARTLEARG FRYSYDMLGE AALTGHDADR
YMQSYVDAIH AIGRASAGRG VYEGPGISIK LSALHPRYAR AQWQRVMDEL YPRVLQLAEL
ARGYDIGLNI DAEEADRLEL SLDLLERLCH APSLAGFKGI GFVIQAYQKR CPRVIDYCID
LARRSGHRLM IRLVKGAYWD SEIKRAQVDG LADYPVYTRK AHTDISYIAC ARKLLGAPDA
VYPQFATHNA QTLATIYELA GPADYRPGQY EFQCLHGMGE PLYEQVVPER PCRIYAPVGT
HETLLAYLVR RLLENGANTS FVNRVADATL PLEALIDNPV DTVDAEARAE GGAGLPHPRI
ALPPQLYGPA RANSQGLDLA AEPTLQCVAD ALAASAATPL EATPLIAAGA PAGPRVPVRN
PADATDMVGQ VQEATTADVD AALRAAAAAQ PAWAATPPAE RARLLRAAAD GLERDMPALL
ALLMREAGKT CANAVAEVRE AVDFLRYYAA QVDGHFDNAT HPPLGPVTCI SPWNFPLAIF
MGQVAAALAA GNVVLAKPAE QTPLIACQAV RLLHQAGVPA AAVQLLPGSG ETVGAALVGD
ARVMGVMFTG STEVARLLQR SLAARLDASG RPIPLIAETG GQNAMVVDSS ALLEQVVADV
LTSAFDSAGQ RCSALRVLCV QRDCADRLLQ MLRGAMQELH MGNPTQLAVD VGPVIDEEAR
ATIARHIERL RASGRPVFQS HAGGQGTAHG TFVPPTLIEL NSITELEREV FGPVLHVVRY
ERDELDTLLA QISATGYGLT QGLHTRIDET VAQVLAHSTA GNVYVNRNMV GAVVGVQPFG
GEGLSGTGPK AGGPLYLLRL LSRHPANATH GALAATAVQV PDASAQPALL APLSALEHWA
QAQGNAALAQ ACAAQAQASC AGLACTLPGP TGERNTYRLL PRERVLCLAD TDEALLLQLS
AVLAAGALAL WPQDAQALCA TLPSEVQARI ALVSDWRGDG LGYDAVLHSG SPETRRVECQ
RVALRPGPIV GVTAMDGAAD ALQAPLRLLL ERAVSINTTA AGGNASLMTM A
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