| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2415 |
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| Symbol | |
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| ID | 4671361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2564563 |
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| End bp | 2565231 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639839483 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_986652 |
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| Protein GI | 121594756 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.752744 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCGCA TTATTGCGGA GTTTGCGCCC GCCCCGGTAA GCGGCTGTTC CCGGCCCCGC
CCCGTGTCGA CGGTTTCATG GAACTTTTGC TGCGGCCCTG CGTTGAAAGA GGCAATGCGC
CCCCTGAGCC ACCTTGAAGA GAGCGACTGC ATCGCCCGCG CCCAGCGCGG CGAGGTCGCG
GCGTTCTCCG AACTGGTGGC CCGCTACCAG GACCGCATCT ACCGTTTTTT GTTCCGCATG
ACGCGTTCGC AGGAGGATGC GCGCGAACTC GCCCAGGAGA CTTTCTTGAA CGCCTACCAG
GCACTGCCCC GCTGGCAGCC GGACGCACAA CTGTCCACCT GGCTGTTTCG CATCGCGCGC
AACCAGGCGT TGGACCTGTT GCGCCGCGCG CAGCGTGTCG CGTTCGTGGA ACTGGACGAG
ACCCTGTCCG AGCAGATGCC GGCGGACACC CCCACGCCCG AGGCTGCACT GCAGGCCCGC
CAGCGCATCG AAGCGCTGGA AGGCGCGCTG CAGCGGCTCT CGGTGGAGCA CCGCGAGATC
CTGCTGCTGC GCGACATCGA AGACATGGCC TACGAGGACA TCGCCGAGGT GCTGGGCATC
AGCCTGGGCA CCGTCAAATC CCGCATTGCC CGCGCACGCG CCGGGCTGCT GCAACTCATG
CCACGCTGA
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| Protein sequence | MRRIIAEFAP APVSGCSRPR PVSTVSWNFC CGPALKEAMR PLSHLEESDC IARAQRGEVA
AFSELVARYQ DRIYRFLFRM TRSQEDAREL AQETFLNAYQ ALPRWQPDAQ LSTWLFRIAR
NQALDLLRRA QRVAFVELDE TLSEQMPADT PTPEAALQAR QRIEALEGAL QRLSVEHREI
LLLRDIEDMA YEDIAEVLGI SLGTVKSRIA RARAGLLQLM PR
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