Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2407 |
Symbol | |
ID | 4671339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2559045 |
End bp | 2559761 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639839475 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_986644 |
Protein GI | 121594748 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.18242 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.658816 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATCGC ATTTCGGCAT TGCCAATGTC TGGGTACAGG GCGACTTCGT CACCCGCGCC GTCGCTGTGC TGCTCATCGG CATGTCGCTG GCATCGTGGA TCGTCATCAT CATCAAGGCG CTGGACATCC TGAAGTTCAA GAAACACGCC CGCCAGGCAC GCGACTTCTG GCACAGCGAA GACTTCGCCG CCGGCCTGAC CAAGCTGGGC TCCGACCCGA GCAACCCCTT CCGCCACCTT GCATTGGAAG GCCGCGAGGC CACGCAACAC CACCGCAACA CGCAGGCCCA TCTGCACGAC AGCCTGGACG TGAGCGACTG GGTCACGCGC TGCCTGCGCA ACTGCATCGA CGAGTTCACG GCGCGCGTGC AGTCGGGCCT GGCCATCCTG GCCTCCGTGG GCTCCACGGC GCCATTCATC GGCCTCTTCG GCACCGTGTG GGGTATCTAC CATGCGTTGG TGGCCATCGG CGCCTCGGGC CAGTCGACCA TCGACAAGGT GGCCGGCCCG ATCGGCGAGG CGCTGATCAT GACCGCGCTG GGCCTGGCCG TGGCCATTCC CGCCGTGCTG GGCTACAACG CCCTGGTGCG GGGCAACAAA TCCATCCTGC ACAGCCTCAA CAGCTTTGCG CACGATCTGC ACGCCTACTT CGTCACCGGC GCGCGCGTTT CGGTACACGG CGAGGCAGCC AAGGTGCTGC CCATCAAGAA AGGCTGA
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Protein sequence | MESHFGIANV WVQGDFVTRA VAVLLIGMSL ASWIVIIIKA LDILKFKKHA RQARDFWHSE DFAAGLTKLG SDPSNPFRHL ALEGREATQH HRNTQAHLHD SLDVSDWVTR CLRNCIDEFT ARVQSGLAIL ASVGSTAPFI GLFGTVWGIY HALVAIGASG QSTIDKVAGP IGEALIMTAL GLAVAIPAVL GYNALVRGNK SILHSLNSFA HDLHAYFVTG ARVSVHGEAA KVLPIKKG
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