Gene Ajs_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2407 
Symbol 
ID4671339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2559045 
End bp2559761 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content65% 
IMG OID639839475 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_986644 
Protein GI121594748 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.18242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.658816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCGC ATTTCGGCAT TGCCAATGTC TGGGTACAGG GCGACTTCGT CACCCGCGCC 
GTCGCTGTGC TGCTCATCGG CATGTCGCTG GCATCGTGGA TCGTCATCAT CATCAAGGCG
CTGGACATCC TGAAGTTCAA GAAACACGCC CGCCAGGCAC GCGACTTCTG GCACAGCGAA
GACTTCGCCG CCGGCCTGAC CAAGCTGGGC TCCGACCCGA GCAACCCCTT CCGCCACCTT
GCATTGGAAG GCCGCGAGGC CACGCAACAC CACCGCAACA CGCAGGCCCA TCTGCACGAC
AGCCTGGACG TGAGCGACTG GGTCACGCGC TGCCTGCGCA ACTGCATCGA CGAGTTCACG
GCGCGCGTGC AGTCGGGCCT GGCCATCCTG GCCTCCGTGG GCTCCACGGC GCCATTCATC
GGCCTCTTCG GCACCGTGTG GGGTATCTAC CATGCGTTGG TGGCCATCGG CGCCTCGGGC
CAGTCGACCA TCGACAAGGT GGCCGGCCCG ATCGGCGAGG CGCTGATCAT GACCGCGCTG
GGCCTGGCCG TGGCCATTCC CGCCGTGCTG GGCTACAACG CCCTGGTGCG GGGCAACAAA
TCCATCCTGC ACAGCCTCAA CAGCTTTGCG CACGATCTGC ACGCCTACTT CGTCACCGGC
GCGCGCGTTT CGGTACACGG CGAGGCAGCC AAGGTGCTGC CCATCAAGAA AGGCTGA
 
Protein sequence
MESHFGIANV WVQGDFVTRA VAVLLIGMSL ASWIVIIIKA LDILKFKKHA RQARDFWHSE 
DFAAGLTKLG SDPSNPFRHL ALEGREATQH HRNTQAHLHD SLDVSDWVTR CLRNCIDEFT
ARVQSGLAIL ASVGSTAPFI GLFGTVWGIY HALVAIGASG QSTIDKVAGP IGEALIMTAL
GLAVAIPAVL GYNALVRGNK SILHSLNSFA HDLHAYFVTG ARVSVHGEAA KVLPIKKG