Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2355 |
Symbol | |
ID | 4672637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2497459 |
End bp | 2500764 |
Gene Length | 3306 bp |
Protein Length | 1101 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639839422 |
Product | UvrD/REP helicase |
Protein accession | YP_986592 |
Protein GI | 121594696 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.112594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAG CTGCCGCGCA AGCCGCCTAC GAACACAACG GCCAACCGGT CACGCGGGAG GCCTTCTACG CCATTGCCTG CGACCCGCAG CGCAGCGTGG CCGTGGAGGC CTGCGCCGGC GCCGGCAAGA CCTGGATGCT GGTCTCGCGC ATGCTGCGCG CGCTGCTGGA CGGCTGTGCG CCGCACGAGA TCCTGGCCAT CACCTTCACC AAGAAGGCCG CGGGCGAAAT GCGCCAGCGC CTGCAGGAAT GGCTGCAGGA GTTTGCGGCC AAGCCGCTGC CTGATCTGGA AAAGGAGCTG ATTGCAAGAG GAATCGGGCC GCAGCGCGCT CTGGACAAGC GCGAGCAGCT ACAAAAACTA TACCGGCAGA CGCTGGACGC GGGCCGCCCC GTGCAGATAC GCACCTTTCA CAGCTGGTTT GCGGCGCTGC TGGGCACGGC GCCGCTGGCG GTGCTGGAGC AGCAGGGCCT GCCCGCCCAT TACGACTTGC TGGAGGATGA CGCCGAGGCA GTGCGCGAGG TCTGGCGCCC CTACCTCGCC GCCGTGGCGC AGGACGCCGC GCTGCGCGCG GATTACGAAG CCTGCGTGGC GCATCACGGC CGCTCGCAGA CGCACAAGGC GCTTGAAGGC GCGCTGGCCA AGCGCGTGGA GTTCGCGCTG GCCGACGAGG CGGGCGTGGT GGACGCATCG ATCCCGCATT TCGGCACGCA GTTCGCGGAC CTTGCCGGCT TGCACCATCC GGCCGATGCG CTGGCCAGCG ACGCAGCGCG CCAGCGCTGG CATGCCTGGG CCCAGGTGCT GGGGGCGCAG GCGAACAAGA CGCCGCAGAA GGCCGCCGAC GCGGTGATCG ACGCCTGGCT GTGCGACGAC CTGGGCCAGC GTCTGGACAC GCTGCGCAAG GCCTTCTTCG TGGCCAGCGA GGATCGCCTG TCCAAGAATC TGGAGAAGTT CGCCGCCGCG CAGGAGGCCG AGGGCGAACT TCAGCGCCTG TGCGCCGCGC GCCGCCAGCA CGAGGCCTGG CTGCACCAGC AGCGCATGGC GCGGCTGGCG CGTGCGCTCA TCGCGCAGTT CGCCCAGCTC AAGCGCGAGC GCGGCTGGGT GGACATGAAC GACGTGGAGC GCACGGCGCT GGTCATGCTG TCCGACCCCA TCCTCTCGGG CTGGGTGCAG GAGCGCCTGG ACGCGCGCGT GCGCCACCTG CTGGTGGATG AGTTCCAGGA CACCAACCCG CTGCAGTGGC AGGCGCTGCA TGCCTGGCTG GCCGGTTACG CGGGCGCGGG CGGCGGCCAG CAGCCGCCCA GCGTGTTCAT CGTCGGTGAC CCCAAGCAGA GCATCTACCG CTTTCGCCGC GCCGAGCCGC AGGTCTTCAA GGCCGCCCAG GCCTTCGTAC GCGAGGGGCT GGGGGGCGAC CTGCTGGCCT GCGACCACAC GCGGCGCAAC GCCATCGGCG TGATCGCAGC GGTGAACCAG GCCATGCAGG CGGCGCAGGC GCAGGGCGAG TACGCGGGCT TTCGCGACCA CACCACCGAA TCGCGCGACC CGGGGCAACT GCTGCGCCTG CCCCCGATCA CGGCGCCTGA CGGGGGTGAT GCCGCCGCGG CCACTGCCCC CGAGTGGCGC GACACTCTGA CCCAGCCGCG CCATGAAGCC GAGGAAACCC TGCGCATGCG CGAATGCGCG CAGGCTGCGC AATGGGTGGC GGCGCAGATC GCCGCGGGCG TGCAGCCGCA GGAGATCATG GTGCTCGCGC GCAAGCGCGA CCGGCTGGCC TCCCTGCAGG AGGCCCTGCG CGCGCTGCAC GTGCCCTGCG TGCAGCCCGA GAAGGCCGAG CTGGGCGAGG CGCCCGAGGT GCAGGACATC GTCGCGCTGC TGGATGCGCT GGTCTCACCG GGGCATGACC TTTCGCTGGC GCGTGCGCTG CGCTCGCCGC TGTTCGGCCT GACGGATCAC GCGCTGGTGC AGATTGCGCT GCGGGTACGC CAGACGGCCG CAGAAGGATC CCCGTGCAGC TGGTTCGACG TACTTCAAAA AAGTGAGCTG CTTCCGCCCG ACCTGCAAGC GCTGGCGCCT GTTTTGGCTC AATACAAGCG ATGGGTGGAA ACACGCCCCC CCCACGATGC GCTGCATGCC ATCTACGAAC ACGGCGACGT GCCCGCGCGC TTTGCCGCCG CGGCTCCCGC CTCGCAGCGT GCGGGCGTGC TGGCCAACCT GCGCGCTTTG CTGGCCGCGG CGCTGCAGCA GGACGGGGGA CGCTACCTCA CGGCCTATGC CTTCGTGCGC GCCATGAAGC GCCCGGGCAT GCGCGCACCC GGCCGCGTGG AGGCGCAGGC CGTGCGCCTG CTCACCATCC ACGGCGCCAA AGGGCTGGAG GCGCACAGCG TGCTGCTGCT GGACACCGAT GCGCGCGCGC AGAAGGCCGA GACCATGGGC GCGCTGGTCG ACTGGCCGGG CGAGCAGGCC GCTCCGCTGC GCTTTGTCTT TCTGGCCAGC GAATCCAACC CGCCGCCCAG TGCGGTGGAC CTGCTGGCGG CGGAACTGGC GGAGCGCCAG CGCGAGGAGC TCAACACCCT CTATGTGGCC ATGACACGCG CCAAGCATTG CCTGGCCTTG TCGGCGGTGC AGTCCAGCAC GGCCGCGCCC GGCAGTTGGT GGAACCGGCT GGCCGAGTCC CTGCAGGACG CGCCAGTGCC GCCCGCCGCG CCATTGGGCG ATGTGGCTGA CGATGCCGCC GTCGCGTTGC CGCAGCTTCC GCCGTATGCG GGGGCTGCGC CGGGGGCACA AGCCGCTGCG GCGGGTGCTC CCGTCTCCAC CCCGCAGTCG CGCCAGGGCG AGGCCATGCA CCAGTTGCTG GAGCAGGCGG GCGTGGTCGG CGCCCGGCGG GCGGGCGGCG TGTGGCCCGC GCGGCGGCTG GCGCAGCTGG CGCGCGACTT CGACATCACG GCGGAGGCCG CCGCACAGGC CGCAGCGATG GCGCGGAGCA TTCTGCAGGG CGAGGGTGCC TGGGCGTGGA ACCCCGATCA CGTGGAACAG GCCCTCAACG AAGCGCCGCT GGTGTACCAG GGCCAGGGTC TGCGTCTGGA CCGCCTGGTG CGGCTGCGCC AGCCGCGTGA GGGTGCGCGC TGGTGGGTGC TGGACTACAA GAGCGCCACC GCGCCCGAGC GCCAGCCGCA GCTGATGGCC CAGCTGCGCC TGTACCGCGA AGCGGTGGGA GCGCAGTTTC CGGGCGAGCG GGTGGGCGCG GCTTTCTTGA CGGGCGATGG GAGGCTGGTG GTCGTGGACG CGCCAGGGCA GGGCGTGCTG TTCTGA
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Protein sequence | MSEAAAQAAY EHNGQPVTRE AFYAIACDPQ RSVAVEACAG AGKTWMLVSR MLRALLDGCA PHEILAITFT KKAAGEMRQR LQEWLQEFAA KPLPDLEKEL IARGIGPQRA LDKREQLQKL YRQTLDAGRP VQIRTFHSWF AALLGTAPLA VLEQQGLPAH YDLLEDDAEA VREVWRPYLA AVAQDAALRA DYEACVAHHG RSQTHKALEG ALAKRVEFAL ADEAGVVDAS IPHFGTQFAD LAGLHHPADA LASDAARQRW HAWAQVLGAQ ANKTPQKAAD AVIDAWLCDD LGQRLDTLRK AFFVASEDRL SKNLEKFAAA QEAEGELQRL CAARRQHEAW LHQQRMARLA RALIAQFAQL KRERGWVDMN DVERTALVML SDPILSGWVQ ERLDARVRHL LVDEFQDTNP LQWQALHAWL AGYAGAGGGQ QPPSVFIVGD PKQSIYRFRR AEPQVFKAAQ AFVREGLGGD LLACDHTRRN AIGVIAAVNQ AMQAAQAQGE YAGFRDHTTE SRDPGQLLRL PPITAPDGGD AAAATAPEWR DTLTQPRHEA EETLRMRECA QAAQWVAAQI AAGVQPQEIM VLARKRDRLA SLQEALRALH VPCVQPEKAE LGEAPEVQDI VALLDALVSP GHDLSLARAL RSPLFGLTDH ALVQIALRVR QTAAEGSPCS WFDVLQKSEL LPPDLQALAP VLAQYKRWVE TRPPHDALHA IYEHGDVPAR FAAAAPASQR AGVLANLRAL LAAALQQDGG RYLTAYAFVR AMKRPGMRAP GRVEAQAVRL LTIHGAKGLE AHSVLLLDTD ARAQKAETMG ALVDWPGEQA APLRFVFLAS ESNPPPSAVD LLAAELAERQ REELNTLYVA MTRAKHCLAL SAVQSSTAAP GSWWNRLAES LQDAPVPPAA PLGDVADDAA VALPQLPPYA GAAPGAQAAA AGAPVSTPQS RQGEAMHQLL EQAGVVGARR AGGVWPARRL AQLARDFDIT AEAAAQAAAM ARSILQGEGA WAWNPDHVEQ ALNEAPLVYQ GQGLRLDRLV RLRQPREGAR WWVLDYKSAT APERQPQLMA QLRLYREAVG AQFPGERVGA AFLTGDGRLV VVDAPGQGVL F
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