Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2299 |
Symbol | |
ID | 4672609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2437210 |
End bp | 2437725 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639839367 |
Product | hypothetical protein |
Protein accession | YP_986537 |
Protein GI | 121594641 |
COG category | [S] Function unknown |
COG ID | [COG1430] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.419159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00439974 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGTCTTCCA TGCCCATGTT TTCGCTCACC GCACCTGCCA TGCCCATCGC GCGCTTGCTG CGCAGCTTTC TGTCTCCCCT GCTGGCATAC GGCGTGGCCT TAGGCCTGTG CGCAGCCGCA GCGGCGCAGG GTGTTCCGCA AATGAACCTG CCGCGCGTGG AGTTGCAGGC CGGCATGCAC CGCATCGACG CCCAGGTCGC CACCGCGCCG CAGGAGCGCC AAGTCGGCCT GATGCACCGC CGCGACATGC CCATGCACGA GGGCATGCTG TTCGTCTTCG AGCAGCCGGC CACGCAATGC TTCTGGATGC GCAATACGCC GCTGCCGCTC ACCGCGGCCT TCGTGGCCGA CGACGGCACC ATCGTGAACC TGGTGGACAT GCAGCCGCTG TCCGAAGAAT CGCACTGCTC CAAGCGGCCG GTGCGCTTCG TGCTGGAGAT GAACCAGGGC TGGTTCGCCA AGCGCGGACT GAAGGCGGGC AGCAGGCTCA GCGGAAGACC GTTTGCGCAG CGGTAG
|
Protein sequence | MSSMPMFSLT APAMPIARLL RSFLSPLLAY GVALGLCAAA AAQGVPQMNL PRVELQAGMH RIDAQVATAP QERQVGLMHR RDMPMHEGML FVFEQPATQC FWMRNTPLPL TAAFVADDGT IVNLVDMQPL SEESHCSKRP VRFVLEMNQG WFAKRGLKAG SRLSGRPFAQ R
|
| |