| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2268 |
|---|
| Symbol | |
|---|
| ID | 4671284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2399566 |
|---|
| End bp | 2400312 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639839335 |
|---|
| Product | RNA methyltransferase |
|---|
| Protein accession | YP_986507 |
|---|
| Protein GI | 121594611 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.144304 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.908224 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCCC CCAAAGTCCT CTTCGGCTTT CACGCCGTGG GCGTGCGCCT GAAGACCGCG
CCGCAAAGCA TCATCGAGAT CTATTACGAG CCCACGCGCC GCGACGCGCG CATGCGCCAG
TTCCTGGAGC GCGCACGCGA GGCGGGGACG CGCCTGATCG AGGCCGATGG CCTGCGCCTG
GCCAAGCTGG CCGGCAGCCA TGGCCACCAG GGCGTGGCGG CGCGGGTCGA GGCCGTGGCG
CAGGTGCGCA CGCTGGACGA ATTGCTGGAC GAGCTGGAGG CCCGCGGCGT GAAGAACCCG
CTGCTGCTGG TGCTGGACGG CGTGACCGAC CCGCACAACC TGGGCGCCTG CCTGCGCGTG
GCCGATGGCG CGGGCGCGCA TGCGGTGATC GCTCCCAAGG ACCATGCGGT GGGCATCAAC
GCCACCGTGG CCAAGGTGGC CAGCGGCGCG GCCGAGACGG TGCCGTATTT CATGGTCACG
AACCTGGCGC GCACGCTGAA CGAGCTCAAG GAGCGCAACA TCTGGGTCAT CGGCACCAGT
GGCGATGCCG ACAAGACGCT GTACCAGGTG GACCTGAAAG GCCCGGTCGC CCTGGTGCTG
GGCGCCGAGG GCCCGGGCAT GCGCCAACTG ACGCGCAAGA CCTGCGACGA ACTGGTGGGC
ATCCCCATGC AGGGCGCTGT CGAGAGCCTG AACGTGTCGG TGGCCAGCGC AGTGTGCCTG
TACGAGGCGC TGCGCCAGCG CGCCTGA
|
|---|
| Protein sequence | MSSPKVLFGF HAVGVRLKTA PQSIIEIYYE PTRRDARMRQ FLERAREAGT RLIEADGLRL
AKLAGSHGHQ GVAARVEAVA QVRTLDELLD ELEARGVKNP LLLVLDGVTD PHNLGACLRV
ADGAGAHAVI APKDHAVGIN ATVAKVASGA AETVPYFMVT NLARTLNELK ERNIWVIGTS
GDADKTLYQV DLKGPVALVL GAEGPGMRQL TRKTCDELVG IPMQGAVESL NVSVASAVCL
YEALRQRA
|
|---|
| |