| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2202 |
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| Symbol | |
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| ID | 4674509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2331946 |
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| End bp | 2333901 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639839271 |
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| Product | DNA mismatch repair ATPase-like protein |
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| Protein accession | YP_986443 |
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| Protein GI | 121594547 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000849326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.525867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA AATACAGAAT GACGGTCGAC CTGAACGTGC TCGACCACCT CGGGATCAAC
CTCTACAGCA ACATCGCCGC CGTTCTGACC GAGGCCGTCG CGAACGCCTG GGATGCCGAC
GCCGAGACCG TCGACATCAA GATCGATTCG GACGGCAACC GGATCGAGAT CCTCGATGAC
GGTATCGGTA TGTCGGTCGA TGACATGAAC GGCAAGTACC TGCGGGTCGG TTATCGACGG
CGAGATGAAG ATCTCGAGCA TGGCAAGACG ACTGCCAAGG GCCGACCGGT GATGGGCCGC
AAAGGGCTGG GAAAACTCTC GCTGTTCTCG ATTGCTAACG TCATCGAAGT CGAGTCAGCC
AGAGATGGCT CAGCTCATGG CCTTCGCATG ACCGTGGACG GAATCCACGA ATCGGTTCAG
AAGAGGGAGC CCTTCTACAG CCCCGAGTCC CTGCCCGCCG ATCAGATCGC GGTAACCAAG
GGAACACGAA TCGTTCTGCG CGATATCAAG CGCCAGCGGC TCGGTCGTGG TGCGCTGGCT
CTTCGCAAGC GCCTGGCGCG CCGCTTCTCT GTGATCGGGG AGGCCCACGG GTTCAAGATC
GATCTCGATG GGCAGCCCAT CACACCCTCC GATCGTGGCG ACCTGCCGAT GGTGCAGTTC
CTCTGGCAGT TCGGTGACGA CGCACTCGAC CTGAGTCCCG CCGGTCAGCT CCTGGAGAAG
GAATCGCTTC CGAACCGCTT CGATGCTTGG GACATGGGCT GGCGGGTCAG CGGCTGGATC
GGTACCGCCA GATTCCCCAA GCAACTCGAT AGTGAGGATG CCGGCAATCT GAATGGCATC
GTCGTGTTCG CCCGTGGCCG CCTGTTTCAC GAGAACATCC TCGACAAACT GAACGACGGG
CGGCTCTACA CGAAGTACCT CACCGGGCAG ATCGAGGCCG ATTTCCTAGA CGCCGACGAC
GCACCAGACA TCGCGACCAG CGATCGGCAG CGCGTGCAGG AGGATGACCC CCGATATGGG
CAGCTGATCG CTTTCCTGAA ATCACGTCTT ACGCAAGTCG AGAAGCGCTG GACGGAATGG
CGCAAGAAGC ACGAGGTCGA GAAAGCGAAG GAAACATCGC CCGCCCTCGC CGAGTGGCTC
GATACGCTCC CCGAGGGATA CAAAAAGAGC GCGGAGACGC TGATCGCCAA ACTCAGTGCG
CTGCCGGTCG ATGAGGAAGA GGATCGGAAG CTCATGTACC GGCACGGCAT CCTGGCATTC
GAGCGCATGA AGCTGCGCGG CTCGACCGAG GAGTTTGTGA CGAGCATCGA GAGTGCCGAC
AGGCTGCTGG CCGTGCTCGC CGACAGAGAC TCGCTTGAGG CATCCCTCTA CCGGGACATC
GTCAAATCGC GTCTGGATGC CATCCGGGAT TTCCAGACCA TCATCGATGA GGACGCAAAG
GAACGGGTGC TCCAGAAGTA CCTGTTCGAT CACCTCTGGT TATTGGACCC GGCATGGGAG
CGCGCCACGG GGAGCCCGAT CATGGAATCG CGCCTGACGA CGGAAGGCGT GCTGATCGAA
GACATGACCG AGAAGGAACG TCTCGGCCGC GTGGACATCG CCTACCGCAC CAATGCGGGC
AAGCACGTCA TCGTCGAGCT GAAGAAGGTC GGCCGCAAGA TGGGATTGCT CGAACTGGTG
GAGCAAGGTC AGACCTACGT CGACAAGCTC ACTAAGATTC TGCGGGAGCA GAACCAGACC
AGCCCCGACA TCGAGGTGAT CTTCGTTCTG GGCAAGACCG TCGACGAAGA GGCATCGAAC
CCCGACCGCC TCAAGTCATC GATGACATCG ATCTCACCGG GCAGCCGCAT CGTCCATTAC
GACACCTTGA TTCGGGGCGC TCAAGAGGCG TATTCGGCAT ACATCGAGAA GAGCAAGTCA
CTCGACAAGC TCGAAAAGAT CGTGGACAGG ATTTGA
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| Protein sequence | MSDKYRMTVD LNVLDHLGIN LYSNIAAVLT EAVANAWDAD AETVDIKIDS DGNRIEILDD
GIGMSVDDMN GKYLRVGYRR RDEDLEHGKT TAKGRPVMGR KGLGKLSLFS IANVIEVESA
RDGSAHGLRM TVDGIHESVQ KREPFYSPES LPADQIAVTK GTRIVLRDIK RQRLGRGALA
LRKRLARRFS VIGEAHGFKI DLDGQPITPS DRGDLPMVQF LWQFGDDALD LSPAGQLLEK
ESLPNRFDAW DMGWRVSGWI GTARFPKQLD SEDAGNLNGI VVFARGRLFH ENILDKLNDG
RLYTKYLTGQ IEADFLDADD APDIATSDRQ RVQEDDPRYG QLIAFLKSRL TQVEKRWTEW
RKKHEVEKAK ETSPALAEWL DTLPEGYKKS AETLIAKLSA LPVDEEEDRK LMYRHGILAF
ERMKLRGSTE EFVTSIESAD RLLAVLADRD SLEASLYRDI VKSRLDAIRD FQTIIDEDAK
ERVLQKYLFD HLWLLDPAWE RATGSPIMES RLTTEGVLIE DMTEKERLGR VDIAYRTNAG
KHVIVELKKV GRKMGLLELV EQGQTYVDKL TKILREQNQT SPDIEVIFVL GKTVDEEASN
PDRLKSSMTS ISPGSRIVHY DTLIRGAQEA YSAYIEKSKS LDKLEKIVDR I
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