Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2150 |
Symbol | |
ID | 4671767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2272136 |
End bp | 2274232 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639839222 |
Product | excinuclease ABC subunit B |
Protein accession | YP_986394 |
Protein GI | 121594498 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.611343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.000405507 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCATGAAG TCACCTCTGA GCCGGCCGCT GGCGCGGCGG ACGGGCAGTT CGTCCAGTTT CCAGGTTCGC CCTTTTCGTT GTACCAGCCA TACCCGCCCG CCGGTGATCA GCCCGAGGCC ATCGCCAAGC TGGTGGAGGG CGTGCAGGAC GGCGAGGTGT TCCAGACCCT GCTGGGGGTG ACGGGCTCGG GCAAGACCTT CACCATGGCG AACGTGATTG CCCGCCTGGG ACGGCCGGCC ATCATCTTCG CGCCCAACAA GACGCTGGCC GCACAGCTGT ACAGCGAGTT CCGCGAGTTC TTCCCCAAGA ACGCCGTGGA GTACTTCGTG AGCTACTACG ACTACTACCA GCCCGAGGCC TATGTGCCTC AGCGCGACTT GTTCATTGAG AAGGACAGCG CCATCAACGA GCACATCGAG CAGATGCGCC TGTCGTGCAC CAAGAGCTTG CTGGAGCGGC GCGATGTGGT CATCGTGGCC ACGGTGTCGG CCATCTACGG CATTGGCGAG CCTGAGAGCT ACCACCGCAT GATCATGACG CTGCGCGTGG GTGACCAGCT GAGCCAGCGT GACGCGATCG CGCAGCTGAT CCGCATGCAG TACCAGCGCA ACGAGCAGGA CTTCAGCCGG GGCAAGTTCC GCGTGCGTGG CGACACCATC GATGTGTTCC CAGCCGAGCA TTCCGAGCTG GCGGTGCGCA TCGAACTGTT CGACGACGAG GTGGAAAGCC TGCAGCTGTT CGACCCGCTC ACGGGGCGTA TCCAGCAAAA AATCCCGCGC TTCACGGTGT ACCCCAGCAG CCATTACGTG ACGCCGCGCG ACAAGGTGCT GGCGGCCGTG GAGACCATCA AGCAGGAACT GGACGAGCGG CTCAAGTTCT TCGTGGCCGA GGGCAAGTTG GTGGAGGCGC AACGGCTGGA GCAGCGCACG CGCTTCGACC TGGAAATGCT CAGCGAAGTG GGGCACTGCA AGGGCATCGA GAACTACACG CGCCACCTGT CGGGTTCTGC GCCTGGCGAG CCGCCGAGCA CGCTGACCGA CTACCTCCCG CCCGATGCGC TGATGTTCCT GGATGAGAGC CACCAGATGA TCGGGCAACT CAACGCCATG TACAACGGCG ACCGCGCGCG CAAGACCACG CTGGTCGAGT ACGGCTTTCG CCTGCCGTCG GCATTGGACA ACCGGCCGCT CAAGTTCGAG GAGTTCGAGC AGCGCATGCG GCAGGTGGTG TTTGTATCGG CCACTCCGGC TGATTACGAG AAGGAGCACT CGGGCCAGGT GGTGGACCAG GTGGTGCGGC CCACCGGCTT GGTGGACCCG GAGGTGGAGG TGCGTCCCGC TACCCATCAG GTGGATGACG TGCTGCAGGA AATACGCATT TGCACGCAAA AGAATCAACG CGTACTCATT ACGACGCTGA CGAAGCGCAT GGCGGAGCAA CTGACCGATT ACCTGAGCGA CAACGGGGTC AAGGTGCGCT ATCTGCACTC TGATATCGAC ACTGTGGAGC GCGTGGAAAT CATTCGCGAC CTGCGCCTGG GAGCCTTCGA TGTCCTGGTG GGGATCAACC TGTTGCGCGA GGGGCTGGAC ATTCCTGAGG TCTCCCTGGT GGCCATCCTG GATGCCGACA AGGAGGGTTT CCTGCGCGCC GAACGCAGCC TGATCCAGAC CATCGGCCGG GCGGCGCGCA ACCTGCACGG CAAGGCCATT CTGTATGCCG ACCGGATCAC CGACTCAATG CGCAAGGCGA TCAACGAAAC GGAACGCCGC CGCGCCAAAC AAATCGCATA CAACGAGGCC CGGGGTATTA CGCCGCGCAG CATCGTCAAG CAGGTGCGAG ACCTGATTGA CGGCGTTTAT AGCGAGAAGG CAGGCCAGGA AGCCCAGCGA CTCCGCGAAG ATGCGGCGCG GCAGGCCGAA TTGGAGGAGA TGTCCGAAAA GGACATTGCC CGCGAAATCA AGCGGCTGGA AAAGCTCATG CTGGAACACG CCCGCAACCT GGAGTTTGAG CAGGCAGCTC GGGTGCGCGA TCAATTGACC CGTCTCAAGG ACCGGGTGTT TGGAGCGCAT GGCGGCGATC AAATCCCTGC CGCATGA
|
Protein sequence | MHEVTSEPAA GAADGQFVQF PGSPFSLYQP YPPAGDQPEA IAKLVEGVQD GEVFQTLLGV TGSGKTFTMA NVIARLGRPA IIFAPNKTLA AQLYSEFREF FPKNAVEYFV SYYDYYQPEA YVPQRDLFIE KDSAINEHIE QMRLSCTKSL LERRDVVIVA TVSAIYGIGE PESYHRMIMT LRVGDQLSQR DAIAQLIRMQ YQRNEQDFSR GKFRVRGDTI DVFPAEHSEL AVRIELFDDE VESLQLFDPL TGRIQQKIPR FTVYPSSHYV TPRDKVLAAV ETIKQELDER LKFFVAEGKL VEAQRLEQRT RFDLEMLSEV GHCKGIENYT RHLSGSAPGE PPSTLTDYLP PDALMFLDES HQMIGQLNAM YNGDRARKTT LVEYGFRLPS ALDNRPLKFE EFEQRMRQVV FVSATPADYE KEHSGQVVDQ VVRPTGLVDP EVEVRPATHQ VDDVLQEIRI CTQKNQRVLI TTLTKRMAEQ LTDYLSDNGV KVRYLHSDID TVERVEIIRD LRLGAFDVLV GINLLREGLD IPEVSLVAIL DADKEGFLRA ERSLIQTIGR AARNLHGKAI LYADRITDSM RKAINETERR RAKQIAYNEA RGITPRSIVK QVRDLIDGVY SEKAGQEAQR LREDAARQAE LEEMSEKDIA REIKRLEKLM LEHARNLEFE QAARVRDQLT RLKDRVFGAH GGDQIPAA
|
| |