| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2137 |
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| Symbol | |
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| ID | 4670771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2260054 |
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| End bp | 2261130 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639839208 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_986382 |
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| Protein GI | 121594486 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00662532 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAATCC GGCAGTCGCG ATTGACTTGG CCGCCGTCGA TGATCACCTT CCATAACCCG
CTGCAGCACA CCCACGCTCC CGAGCACGAA TTTTTCCGCG GCGAGCGTAT ACCCTGTTTC
GAGAACCCGA CGCGCGCGGC CTATGTGGAA GCCGCTTTGA CTGCGCGGGG TCATGTACTG
CACCCCCCGG ATGTGGATTG CACGGAGGTA CTGGCAAAGA TCCATGCGCC GCGCTACCTG
GCTTTTCTGG CTTCGGCGTG GCAGCAATGG GTGTCGCTGG GTGAAGGGCA GGACCGTGTG
CAGCCGTTTC CGTCGGTATG GCCGGTACGC ACATTGCGCT CGGATATAGA GCCCGACAAT
TTCATTGCCA AGCTGGGGCT GTACTCCATG GACAACGGCT CGCCGCTTGC AGCGGGCACC
TGGACGGCAG CCAAAGCAGG CGCCGACGCG GCGGCCAGTG CCGCGGCGCG CCTGGCGGCT
GGCGAGCGCG CCGCGTTCTG CAGCACACGC CCGCCGGGGC ACCATGCAGG CCCCGATTTC
ATGGGCGGGT ACTGCTTCTT GAACAACGCG GCCGTGGCGG CCCAATGGCT GCGCGACCAC
GGCGCAGCCC GTGTGGCCGT GTTGGACGTG GATTACCACC ACGGCAATGG CACGCAGAGC
ATCTTCTATG ACCGTGCGGA CGTGCTCTTC GTCAGCATCC ATGGCGATCC CCGCACCGAA
TACCCCTTCT ATCTGGGACA TGCCGATGAA ACCGGCGCAG GCCTCGGTAC GGGCGGCAAC
CTGAACCTGC CTCTGCCGGC CGGCACCGAT GCTGCCACTT GGTTTGCGGC CCTGGAGCAG
GCCTGCGCGC GCATCGCCGC TTTTGGAGCG GATGCCCTGG TGGTCTCGCT GGGACTGGAT
ACCTATGAGG GCGATCCGAT CTCGCGCTTT CGGCTGGCGA CGACGGATTT TCTGCGGCTG
GGTGCGCGGC TGCGTGGTGT GGGACTGCCC ACTGTGCTGG TGCTGGAAGG CGGCTACGCA
GCGGCGGAGT TGGGAACGAA TGCGGTGAAT GTGCTCGAGG GTTTCGAGCA GGCATGA
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| Protein sequence | MTIRQSRLTW PPSMITFHNP LQHTHAPEHE FFRGERIPCF ENPTRAAYVE AALTARGHVL
HPPDVDCTEV LAKIHAPRYL AFLASAWQQW VSLGEGQDRV QPFPSVWPVR TLRSDIEPDN
FIAKLGLYSM DNGSPLAAGT WTAAKAGADA AASAAARLAA GERAAFCSTR PPGHHAGPDF
MGGYCFLNNA AVAAQWLRDH GAARVAVLDV DYHHGNGTQS IFYDRADVLF VSIHGDPRTE
YPFYLGHADE TGAGLGTGGN LNLPLPAGTD AATWFAALEQ ACARIAAFGA DALVVSLGLD
TYEGDPISRF RLATTDFLRL GARLRGVGLP TVLVLEGGYA AAELGTNAVN VLEGFEQA
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