| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2132 |
|---|
| Symbol | |
|---|
| ID | 4670618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 2256586 |
|---|
| End bp | 2257641 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639839203 |
|---|
| Product | dihydroorotate dehydrogenase 2 |
|---|
| Protein accession | YP_986377 |
|---|
| Protein GI | 121594481 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.968408 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0597535 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCTGC TGCCCTACGC CCTCGCCCGC TCCTTTCTCT TCGGCATGGA CGCCGAAGCC
GCCCACGAAC TCACCATGGA CATGCTGGCG CGCGGCCAGC GCACGCCGCT GCAATGGGCC
TGGTGCAATG AAACCGTGAG CGACCCCATC GAACTGGCAG GCCTGCGCTT TCCCAACCGC
GTGGGTCTCG CGGCGGGGCT CGACAAGAAC GCCCGCTGTA TCGACGCGCT GGCCGCCATG
GGCTTCGGCT TCGTGGAGGT GGGCACCGTC ACGCCCCGTG CACAGCCCGG CAACCCCAAG
CCGCGCATGT TCCGCCTGCC CGAGGCGCGT GCGCTCATCA ATCGCCTGGG CTTCAACAAT
GAAGGGCTGG ATGCCTTCGT GGCCAACGTG CAGCGCTCGC AGGTCCGCAC ACAGGGCCGC
GGCCAGAGCA AACTGCTGCT GGGTCTGAAC ATCGGCAAGA ACGCCACCAC GCCCATCGAA
GACGCCACGC GCGACTACCT CACCTGCCTG GAAGGCGTGT ACCCGCATGC CGACTACGTT
ACGGTGAATA TCAGTTCGCC CAACACGCAG AACCTGCGCG CTCTGCAGAG CGATGCGGCG
CTTGACGGCC TGCTGGGCGC CATTGCCGAG CACCGCGAAC AGCTCGCCGC CGCCCAGGGC
CGCCGCGTGC CCATCTTCGT GAAAATTGCG CCGGATTTGG ACGAGGCCCA AGTGGCCGTG
ATTGCCACCA CACTTCAGCG CCACGGCATG GATGGCGTGG TTGCCACCAA CACCACCATC
CGCCGGGACG CCGTGCAGGG CCTGCGCCAT GCCGGCGAGA CTGGAGGCCT GAGCGGTGCA
CCCGTGCTGG AAGCCAGCAA CGCCGTGATC CGCCAGTTGC GTGCCGCGCT GGGCCCGACT
TTCCCGATCA TCGGCGTGGG CGGCATTCTG AGCGCCGAAG ATGCTGTGAG CAAAATCCGC
GCAGGCGCCG ATGTCGTGCA GATCTACACC GGCCTGATCT ATGAAGGCCC TGCCCTCGTG
GGCCGTGCGG CCAAGGCGAT CCGCGATCTG CGTTAA
|
|---|
| Protein sequence | MSLLPYALAR SFLFGMDAEA AHELTMDMLA RGQRTPLQWA WCNETVSDPI ELAGLRFPNR
VGLAAGLDKN ARCIDALAAM GFGFVEVGTV TPRAQPGNPK PRMFRLPEAR ALINRLGFNN
EGLDAFVANV QRSQVRTQGR GQSKLLLGLN IGKNATTPIE DATRDYLTCL EGVYPHADYV
TVNISSPNTQ NLRALQSDAA LDGLLGAIAE HREQLAAAQG RRVPIFVKIA PDLDEAQVAV
IATTLQRHGM DGVVATNTTI RRDAVQGLRH AGETGGLSGA PVLEASNAVI RQLRAALGPT
FPIIGVGGIL SAEDAVSKIR AGADVVQIYT GLIYEGPALV GRAAKAIRDL R
|
|---|
| |