Gene Ajs_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2105 
Symbol 
ID4673965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2226597 
End bp2227235 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content65% 
IMG OID639839180 
Producthypothetical protein 
Protein accessionYP_986354 
Protein GI121594458 
COG category[R] General function prediction only 
COG ID[COG3560] Predicted oxidoreductase related to nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCAC CTGTCTATCT ACCAGTTGGA AGATTACCCA TGAACAATGC TTACCTGGAC 
GCGCTGAAGA AGCGCCGCAC CCAATACGCC CTGGGCCGCA ACCTGTCCGC CTCCAAGGAG
GAACTGCTGG CCCTGATCCA GGACGCGATC AAGCACAGCC CGTCGTCCTT CAATTCGCAG
AGCTCGCGCG CGCTGGTGCT GTTCGGCGCG GAAAGCGAAA AGCTGTGGGA CATCGCCATC
GAGGAAGTCC GCAAGGTCGC GCCGGCCGAA GGCTTCGACA AGACCGAGGC CAAGCTCAAG
AGCTTCGCGG CCGGCGTGGG CACGGTGCTG TTCTTCGAAG ACCAGGACGT GGTGCGCAGC
CTGCAGGAGA AATTCGCCCT CTACGCCGAC AACTTCCCGG TCTGGTCCGA GCAGGCGGGC
GGCATGGCCC AGCTGTCGGT GTGGTCTGCC CTGGCCAACG CCGACGTGGG CGCCAGCCTG
CAGCACTACA ACCCGCTGAT CGACGCCGCC GTGGCGCGCG CATGGAACAT TCCCGCCTCG
TGGAAGCTGC GCGCGCAGAT GCCGTTCGGC TCCAACGAAG CCGGCTTCGG CGAAAAAGCC
TTCATGGACG ACGCCGAGCG CTTCCGCGTC GCGGGCTGA
 
Protein sequence
MPAPVYLPVG RLPMNNAYLD ALKKRRTQYA LGRNLSASKE ELLALIQDAI KHSPSSFNSQ 
SSRALVLFGA ESEKLWDIAI EEVRKVAPAE GFDKTEAKLK SFAAGVGTVL FFEDQDVVRS
LQEKFALYAD NFPVWSEQAG GMAQLSVWSA LANADVGASL QHYNPLIDAA VARAWNIPAS
WKLRAQMPFG SNEAGFGEKA FMDDAERFRV AG