Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2096 |
Symbol | |
ID | 4672517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2217044 |
End bp | 2218894 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639839174 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_986348 |
Protein GI | 121594452 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.210569 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATCA TCGACATCAA GGTGCCCGAC ATCGGCGACT TCGCCGAGGT GGGCGTGATC GAAGTGCTGG TGCAGCCGGG CGACACCATC CGGGCCGAGC AGAGCCTGGT CACCGTGGAG TCCGACAAGG CCTCCATGGA GATTCCCAGC AGCCACGCCG GGGTGGTCAA GGAGCTCAAG GTCAAGTTGG GCGACAAGGT GGCCGAGGGT TCCGTGCTGC TGACGCTGGA AGTGGCGCAG GGAGCGGCGG CGCCGGCTGC GGCCCCTGCC GCGGCGAGCA CGCCCAGCGC ACCGCCATCT GAGTCAAAAC CGGCTCCAGC GCCCGCTGTT CAAGCGCCAG CAGCTCCTAA AACAGAAGCG GCCAGCTTCG GCGGCAGTGC CGACGTGGAG TGCGATGTGC TGGTGCTGGG CGGCGGCCCC GGCGGTTACA GCGCCGCCTT CCGCGCGGCC GACCTGGGCC TGAACGTGGT GCTGGTCGAG CGCTACGCCA CCCTGGGCGG CGTGTGCCTG AACGTGGGCT GCATTCCCTC CAAGGCGCTG CTGCACGTGG CCGCGGTGAT GGACGAAGTG AGCCACCTGA AGAGCGCCGG CATCGACTTC GGCGCGCCGC AGGTCCACAT CGACACCCTG CGCGGCCACA AGGAAAAGGT CATCGGCAAG CTGACCGGCG GGCTGGCGCA GATGGCCAAG ATGCGCAAGG TGACCGTGCT GCGCGGCTAC GGCCACTTCG TCGGCGCCAA CCACCTGGAG GTGGAGGAAA CCACCGGCAC CGGCCAGGAC AAGACCGGCA GCAAAAAGGT GGTGGCGTTC AAGAAGGCCA TCATCGCCGC TGGCAGCCAG GCCGTGCGCC TGCCCTTCAT GCCCGACGAT CCGCGCGTGG TGGACTCCAC CGGCGCACTG GCGCTGCAGG GCGTGCCCCA AAAGATGCTC ATCGTCGGCG GCGGCATCAT CGGCCTGGAA ATGGGCACGG TGTACAGCAC GCTGGGCGCC CGCCTGGACG TGGTCGAGAT GATGGACGGC CTGATGCAGG GCGCGGACCG CGACCTCGTC AAGGTCTGGG AGAAGATGAA CAAGCACCGC TTCGACAACA TCCTGCTCAA GACCAAGACC GTGGGCGCCC AGGCCACGCC CGAAGGCATC CAGGTGCAGT TCGAGGGCCT GGACGGCACG AAGAGCGAAG GCACCTACGA CCTGGTGCTG CAGGCCGTGG GCCGCACCCC CAACGGCAAG AAGATCGCTG CCGACAAGGC CGGCGTGTCT GTGACGGACC GCGGTTTCAT CAACGTGGAC ATCCAGATGC GCACCAATGT GCCGCACATC TTCGCCATCG GCGACATCGT GGGCCAGCCC ATGCTGGCGC ACAAGGCGGT GCATGAAGCG CACGTGGCGG CCGAGGTCAT CGCCGGTGAA CTGCAGGGCA ACAAGGAACT GGCCAGCGCC GCCTTCAACG CCCGCGTGAT CCCGAGCGTG GCCTATACCG ACCCCGAAGT GGCCTGGGTG GGTCTGACCG AGGACCAGGC CAAGGCGCAG GGCATCAAGG TCAAGAAGGG CCTGTTCCCC TGGGCGGCCA GCGGCCGCGC CATCGCCAAC GGCCGCGACG AAGGCTTTAC CAAGCTGCTG TTCGACGACA GCCCCGAGGC GCACGGCCAC GGCCGCATCC TGGGCGGCGG CATCGTCGGC ACGCACGCCG GCGACATGAT CGGCGAGATC GCCCTGGCCA TCGAGATGGG CGCCGACGCG GTGGACATCG GCAAGACCAT CCACCCGCAC CCCACGCTGG GCGAGAGCAT CGGCATGGCG GCGGAGATTG CCCACGGCAG TTGCACGGAC GTGCCGCCGC AGCGCAGGTA A
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Protein sequence | MAIIDIKVPD IGDFAEVGVI EVLVQPGDTI RAEQSLVTVE SDKASMEIPS SHAGVVKELK VKLGDKVAEG SVLLTLEVAQ GAAAPAAAPA AASTPSAPPS ESKPAPAPAV QAPAAPKTEA ASFGGSADVE CDVLVLGGGP GGYSAAFRAA DLGLNVVLVE RYATLGGVCL NVGCIPSKAL LHVAAVMDEV SHLKSAGIDF GAPQVHIDTL RGHKEKVIGK LTGGLAQMAK MRKVTVLRGY GHFVGANHLE VEETTGTGQD KTGSKKVVAF KKAIIAAGSQ AVRLPFMPDD PRVVDSTGAL ALQGVPQKML IVGGGIIGLE MGTVYSTLGA RLDVVEMMDG LMQGADRDLV KVWEKMNKHR FDNILLKTKT VGAQATPEGI QVQFEGLDGT KSEGTYDLVL QAVGRTPNGK KIAADKAGVS VTDRGFINVD IQMRTNVPHI FAIGDIVGQP MLAHKAVHEA HVAAEVIAGE LQGNKELASA AFNARVIPSV AYTDPEVAWV GLTEDQAKAQ GIKVKKGLFP WAASGRAIAN GRDEGFTKLL FDDSPEAHGH GRILGGGIVG THAGDMIGEI ALAIEMGADA VDIGKTIHPH PTLGESIGMA AEIAHGSCTD VPPQRR
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