| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2092 |
|---|
| Symbol | |
|---|
| ID | 4672289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 2213887 |
|---|
| End bp | 2214366 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639839170 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_986344 |
|---|
| Protein GI | 121594448 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2947] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.598256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.211749 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAC CCACTACGCG CTTTTGGCTC ATGAAATCGG AGCCCGACGA GTGTTCCATT
GACGACGCAT TGGGCGCCCC GGGCGCCACC GTGCCCTGGA CCGGCGTGCG CAATTACCAG
GCGCGCAACT TCATGCGCGA CGAGATGCAG GTGGGGGATG GCGTGCTCTT CTACCACTCA
AGCTGCCCTG CACCCGGTAT CGCCGGCATT GCACGCATAG CCTCGGGCGT ACGCCCCGAT
CCCACACAGT TCGACCCTGA ATCCCCTTAC TACGACCCCA AGTCACCCCT TGAGAAACCC
CGGTGGCTGC TGCGGGACGT GCAAGCCGTG CGCAAGACAC GGCTCATTGG CCTGGCGGAA
CTGCGCGCCC ATCCCGAGTT GGCGTCGATG CGCGTACTGC AGCGAGGCAA CCGGTTGTCG
ATCACGCCGC TGCAGTCCCA GGAGTGGACC TTCATCACGC GGGTGCTCGC GGCAGACTAG
|
|---|
| Protein sequence | MTTPTTRFWL MKSEPDECSI DDALGAPGAT VPWTGVRNYQ ARNFMRDEMQ VGDGVLFYHS
SCPAPGIAGI ARIASGVRPD PTQFDPESPY YDPKSPLEKP RWLLRDVQAV RKTRLIGLAE
LRAHPELASM RVLQRGNRLS ITPLQSQEWT FITRVLAAD
|
|---|
| |