Gene Ajs_2091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2091 
Symbol 
ID4671859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2213174 
End bp2213752 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content66% 
IMG OID639839169 
ProductNLP/P60 protein 
Protein accessionYP_986343 
Protein GI121594447 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.315099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.543667 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGTC GGTTGTGCCT GCTGCTGCTG CTTTGCTCGA ATGCCTACGC CGCTCCCTCC 
CCCGAGGTGG AGCGGGCAGC CGCCACCCCT GCAGTCAGCA TTGACCGCAG CCTGCTCGTC
CAGTTGCAGG ACGTTCAGCA CAACGTGGCA GACCGCACCT CCTCCCTGAT TTCCACCGCC
ATGGGCTTCA TCGGCGTGCC ATACCGCCGG GGTGGCAGCA GTGCCGAGAC GGGTTTTGAT
TGCAGCGGCT TCGTGCGCGC CATCTACGAG CAGGCCAAGG GCATGGTGCT TCCACGCCGC
GCCAACGAGC AGGCCGCCGC CACCGAAGTC ATCGACAAAA AAGACCTGCA GCCCGGCGAC
CTGGTGTTCT TCAACACCAT GCGCCGCGCG TTCAGCCACG TAGGCATCTA CGTGGGTGAC
GGCAAGTTCA TCCATGCCCC GCGCTCCGGT GCGCAGGTGC GCGTGGAAGA CATGGGCGCT
TCCTACTGGC AGCGGCGCTT CAACGGTGCA CGGCGCGTGA CGACGGACGA AGACGCCGCC
GCCATGGCCA TTTCCGCGCG CGCTCCGGCC GCCAACTGA
 
Protein sequence
MFRRLCLLLL LCSNAYAAPS PEVERAAATP AVSIDRSLLV QLQDVQHNVA DRTSSLISTA 
MGFIGVPYRR GGSSAETGFD CSGFVRAIYE QAKGMVLPRR ANEQAAATEV IDKKDLQPGD
LVFFNTMRRA FSHVGIYVGD GKFIHAPRSG AQVRVEDMGA SYWQRRFNGA RRVTTDEDAA
AMAISARAPA AN