| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2090 |
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| Symbol | |
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| ID | 4671944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2211434 |
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| End bp | 2212870 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639839168 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_986342 |
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| Protein GI | 121594446 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.126245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.641538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGATT TCATGACGCG TGGACCTGTT TCCCCCACTT CGCGCCAGCC GCTGCTGTGG
GTGGTCGCGC TGGGCTTCTT CATGCAGACG CTGGACGCCA CCATCGTCAA CACGGCCTTG
CCGGCCATGG CGCGCGACCT GGGCGAGAGC CCGCTGCAGA TGCACTCGGT GATCGTGGCG
TATTCGCTGG CCATGGCGGT GCTGATTCCG GCGTCGGGCT GGCTGGCGGA CCGTTTCGGC
ACGCGGCGGG TGTTCATGTC GGCGATCGCG TTGTTCGTGC TCGGCTCAGT GTTGTGCGCG
CTGTCGTCCA CGCTGCCGCT GCTGGTGGGC GCGCGCGTGG TCCAGGGGCT GGGCGGTGCG
CTGCTGCTGC CCGTGGGGCG GCTGGCGGTG CTGCGGGCGT TTCCGCGCGA CGAGTTCATC
CGCGCCATGA GCTTCGTGGC GATTCCCGGG TTGGTGGGGC CGCTGATCGG GCCGACCCTG
GGCGGCTGGA TGGTGGAGTA CGCCTCCTGG CATTGGATCT TCTGGGTCAA TGTGCCCGTG
GGGCTGGTGG GCTTGATGGC CGCGCGGCGC TTCATGGCGG CGGGAGAGGT GCTGGCCGTG
CGTGGATTCG ACGCCATGGG CTATGGCCTG CTGGCCTTTG GCATGGCGGC CGTGTCGCTG
GCGGTGGAGG GCATGGCCGG CGGTGGTGCG CGCAGCGCGT CGTCGCTGGT GATGATGATC
TTTGGCCTGG CCAGTCTGGC GGCCTACTGG CTGCACGCGC TGCGCAGCGA TGCGCCGCTG
TTTGTGCCGG GGTTGTTCGC GGTGCGCACG CTGCGCGTGG GGCTGCTGGG CAACTTGTTT
TCGCGGCTGG GCAGCTCGTG CATGCCCTTC ATGATCCCGC TGGTGCTGCA GGTCAGCCTG
GGCTACGCAC CCATGCAGGC GGGCATGATG ATGCTGCCCA CGGTGCTGGG CAGCATGGCC
GTGAAACCTG CGGTCACCTT CATGGTGCGG CGCTGGGGCT ATCGCGAGGT GCTGGTGGTC
AATACCTGCG CGCTGGCGTT GCTCATCGCC AGCTTCTGCC TGATCACGCC CGGCCAGCCC
CCGTGGCTGC TGATGGTGCA GTTGGCGGCG TTTGGCGGCG TGAACTCCAT GCAGTTCTCG
GCCATGAACA CGGTCACGCT CAAGGACCTG GACACAGGTC ATGCCAGCAG CGGCAACAGC
CTGCTGTCCA TGGTGCAGAT GCTGGCCATG GGCATGGGGG TGGCAGCTGC CGGGGCGGTG
CTGGCGAGCT TCCAGGGCTA CTTTGGCGCC GCAGATGCGC AGGACACGCT CCACGCGTTC
CGCGCCACGT TTGCCTGCAT GGGTGTGCTG ACGCTGGCGG CCACGGCGCT GTTCCTGCAG
TTGCCGCCGC ACGAGCCGCC GCGCCCCCAT CCCCTGGGCC CCGAGGAGCA GAGCTGA
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| Protein sequence | MGDFMTRGPV SPTSRQPLLW VVALGFFMQT LDATIVNTAL PAMARDLGES PLQMHSVIVA
YSLAMAVLIP ASGWLADRFG TRRVFMSAIA LFVLGSVLCA LSSTLPLLVG ARVVQGLGGA
LLLPVGRLAV LRAFPRDEFI RAMSFVAIPG LVGPLIGPTL GGWMVEYASW HWIFWVNVPV
GLVGLMAARR FMAAGEVLAV RGFDAMGYGL LAFGMAAVSL AVEGMAGGGA RSASSLVMMI
FGLASLAAYW LHALRSDAPL FVPGLFAVRT LRVGLLGNLF SRLGSSCMPF MIPLVLQVSL
GYAPMQAGMM MLPTVLGSMA VKPAVTFMVR RWGYREVLVV NTCALALLIA SFCLITPGQP
PWLLMVQLAA FGGVNSMQFS AMNTVTLKDL DTGHASSGNS LLSMVQMLAM GMGVAAAGAV
LASFQGYFGA ADAQDTLHAF RATFACMGVL TLAATALFLQ LPPHEPPRPH PLGPEEQS
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