| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2058 |
|---|
| Symbol | |
|---|
| ID | 4671440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 2167381 |
|---|
| End bp | 2168034 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639839136 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase |
|---|
| Protein accession | YP_986310 |
|---|
| Protein GI | 121594414 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
|---|
| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.183278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.448099 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCACA GCCCTCTTTC CTCCTCCATC GCCGACCTGC GCAAGAGCTA CGAGCGCGCC
GAGCTCAGCG AGGACGCCTC CCACGCCGAT CCCTTGCTGC AGTTCGACCA ATGGCTGCGC
GAAGCCATCG CTGCCCAGGT GCCCGAGCCC AACGCCATGA CCGTGGCCAC CGTGGGCAGC
GACCTGCGTC CCAGCACCCG CGTGGTGCTC ATCAAGGGGT ATGACGCGCA GGGCATCGTC
TGGTACACCA ACTACGACAG CCGCAAGGGC CGCCAGATCG CGGGCAACCC CTATGCCGCG
CTGCAATTCC ACTGGGTGGA GCTGGAGCGC GTGGTGCGCA TCGAGGGCGT GGTGGAAAAG
GTGAGCGAGG CCGAGAGCGA CGCCTACTTC CACAGCCGCC CGCTGGACTC GCGCATCGGC
GCCTGGGCCA GCCCGCAAAG CCAGGTCATC CCCAGCCGCG GCATGCTGGT GGCCAACGCG
GCCAAGTACG GCGCGCAGTT CCTGCTCAAG CCGCCCCGCC CGCCGCACTG GGGGGGCTTT
CGCCTGCGGC CGGATCAGTG GGAGTTCTGG CAGGGCCGCA AGAGCCGCCT GCACGACCGG
TTGCGCTACC GCCTGGAGGA CGGCACGTGG GAGCGCGAGC GGCTGGCGCC GTAA
|
|---|
| Protein sequence | MSHSPLSSSI ADLRKSYERA ELSEDASHAD PLLQFDQWLR EAIAAQVPEP NAMTVATVGS
DLRPSTRVVL IKGYDAQGIV WYTNYDSRKG RQIAGNPYAA LQFHWVELER VVRIEGVVEK
VSEAESDAYF HSRPLDSRIG AWASPQSQVI PSRGMLVANA AKYGAQFLLK PPRPPHWGGF
RLRPDQWEFW QGRKSRLHDR LRYRLEDGTW ERERLAP
|
|---|
| |