| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2057 |
|---|
| Symbol | |
|---|
| ID | 4671633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 2166815 |
|---|
| End bp | 2167342 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639839135 |
|---|
| Product | superoxide dismutase, copper/zinc binding |
|---|
| Protein accession | YP_986309 |
|---|
| Protein GI | 121594413 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2032] Cu/Zn superoxide dismutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0494601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.319354 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTTC GCTACCTCCC CACGGGCGCG GCCCTGGCGG CTGCCATCGC ACTCGCCGGC
TGCGCATCCC TGTCCAGCGC GCCCTCGGCC ACCGCCCGGC TGGAGCCTAC GCGCGGCAAC
AGCACCCAGG GCACGGTGCG CTTCGTGCAG AGCGGTGATG CGGTGCGCGT CAGCGGCACG
GTCAGCGGGC TCAAGCCGGG GGCGGAGCAC GGGTTTCACA TTCATGAGAA AGGCGACTGC
TCCAGCGGGG ACGGCAACAG CGCGGGCGGC CACTTCAATC CCACGGGCAC ACCGCATGGC
CAACACGGCA AGGGACCGCA CCACACCGGC GACCTGCCCA GCCTGCGCGC GGACGGCAAC
GGCGTGGCCA CCTTCAACTT CGAGTCGCGC AGCATTCGCG TGGGCTCCGG CGCCACCGAC
ATCGTGGGTC GCGGCCTGAT CGTGCATGCC AACCCCGACG ACTACGTCAC CCAACCCACC
GGCAACGCGG GCGCGCGCCT GGCGTGCGCG GTGATCGCCG GTCGCTGA
|
|---|
| Protein sequence | MSLRYLPTGA ALAAAIALAG CASLSSAPSA TARLEPTRGN STQGTVRFVQ SGDAVRVSGT
VSGLKPGAEH GFHIHEKGDC SSGDGNSAGG HFNPTGTPHG QHGKGPHHTG DLPSLRADGN
GVATFNFESR SIRVGSGATD IVGRGLIVHA NPDDYVTQPT GNAGARLACA VIAGR
|
|---|
| |