Gene Ajs_2055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2055 
Symbol 
ID4671647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2165586 
End bp2166125 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content70% 
IMG OID639839133 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_986307 
Protein GI121594411 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0263919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.321427 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTCA ACAGCTCCGA CGACGACAGC CAGCAACGCT TCGCACTCGG GTTCCTCTTT 
GCGCTGATCG CGCTGGTGGT CTCCACCGTC GTGGGCGTGG TGGTCTACAA GCGTGGCATT
GCCCACGCCC ACAAGGCGCC GGCCGCCGCT GTGGCCCCTG CGGCTGAGGC AGCCGCGCCC
GGCGTGGTGA TCATGATCAC CGAGGACGCC GCCAGCGTGG TGGTGGAGGG CGGTGTGGTG
AAGTTCTTCT TCGCCACCGG CAAGGCCGAG CTGGCCCCGG GCGCCAACGA AGCGCTGGGC
GACGTGGTCA AGGGCGTGGT GGACGGCGGC AAGACCGCGG TGGTGTCGGG CTTCCATGAC
GCCACGGGCG ACGCGGCCGT GAACGCCGAG CTGGCCAAGC AGCGCGCGCT GGCCGTGCGC
GACGCCCTGA AGGCCCTGGG TGTGGCCGAA GAGAAGGTGG AGCTGAAGAA GCCCGAAGCC
ACGCAGGGCA GCGGCAGCAA TGCCGAGGCG CGCCGCGTGG AGGTGATTCT GGCTCCCTGA
 
Protein sequence
MSFNSSDDDS QQRFALGFLF ALIALVVSTV VGVVVYKRGI AHAHKAPAAA VAPAAEAAAP 
GVVIMITEDA ASVVVEGGVV KFFFATGKAE LAPGANEALG DVVKGVVDGG KTAVVSGFHD
ATGDAAVNAE LAKQRALAVR DALKALGVAE EKVELKKPEA TQGSGSNAEA RRVEVILAP