| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2046 |
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| Symbol | |
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| ID | 4671948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2156795 |
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| End bp | 2157586 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639839124 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_986298 |
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| Protein GI | 121594402 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00404736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAAA CACTCACCAC GTCAACTATC TCCTTCGGCC ATCACGGTCG CGTGTGTATT
GTCACGGGCG GTGCCCAGGG CATTGGCGAG GCCTGCGTGC GCAGGCTGGC GCGCGACGGT
GCCAAGGTGG TGATCGCAGA CATGGATGAT GCCCGCGGAC GTGCTCTTGC CGATGCGGTG
CCGCAAGCCG CCTACATTCA TTGCGATGTG GGCAACAAGT CCGAAGTGGA TGCCCTGGTA
GGTCAAACCA TGGCGCTGCA CGGGCGCATC GACGTATTGG TCAACAACGC GGGCATCTTC
CGCGCTGCGG ACTTTCTGGA TGTGACCGAG GAGGACTTCG ACGCGGTACT GCGCGTGAAC
CTCAAGGGTG CCTTTCTCAT GGGCCAGGCC GTGGCACGCG AAATGGTGCG CTCGGGCGGC
GGCAGCATCG TGAACATGAG TTCCGTCAAT GGCGTTTTGG CCATTCCGAA CATCGCCAGC
TACAACGTGA GCAAGGGCGG CATCAATCAG CTCACCCGCG TGATGGCGCT GGCGCTGGCG
GACCGTGGCA TCCGCGTGAA CGCGGTGGCG CCCGGCACCA TTGCCACGGA ACTCGCCGCG
AAGGCCGTGC TGACGAGCGA CGAGGCCCGG CTCAAGATCC TGAGCCGCAC GCCGATGAAG
CGCCTGGGTG AGCCTTCGGA GGTCGCTGAT GTGGTGGCAT GGCTCGCCAG CGACGCCGCC
AGTTATGTGA CCGGCGAGAT CGTCACCGTG GACGGCGGCC GCATGACGCT CAACTACACC
GTGCCGGTCT AG
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| Protein sequence | MSQTLTTSTI SFGHHGRVCI VTGGAQGIGE ACVRRLARDG AKVVIADMDD ARGRALADAV
PQAAYIHCDV GNKSEVDALV GQTMALHGRI DVLVNNAGIF RAADFLDVTE EDFDAVLRVN
LKGAFLMGQA VAREMVRSGG GSIVNMSSVN GVLAIPNIAS YNVSKGGINQ LTRVMALALA
DRGIRVNAVA PGTIATELAA KAVLTSDEAR LKILSRTPMK RLGEPSEVAD VVAWLASDAA
SYVTGEIVTV DGGRMTLNYT VPV
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