Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2042 |
Symbol | |
ID | 4672150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2150988 |
End bp | 2152520 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639839120 |
Product | carboxyl transferase |
Protein accession | YP_986294 |
Protein GI | 121594398 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0884189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAGACA TCCTGGATCA ACTGGAGAAA AAGCGCGAAC TCGCCCGCCT GGGCGGTGGC CAGAAGCGCA TCGACGCCCA GCACAAGAAG GGCAAGCTCA CCGCGCGCGA GCGCATCGAA CTGCTGCTGG ACGACGGCAC CTTCGAGGAA TGGGACATGT TCGTGGAGCA CCGCTGCACG GACTTCGGCA TGGAGAACAC CAAGATCCCC GGTGACGGCG TGGTCACCGG CTACGGCATG ATCAACGGCC GCCTGGTGTT CGTGTTCAGC CAGGACTTCA CGGTGTTCGG CGGCGCGCTG TCCGAGACCC ACGCCGAGAA GATCTGCAAG GTCATGGACC AGGCCATGAA GGTCGGTGCG CCGGTGATCG GCCTGAACGA CTCGGGCGGC GCGCGCATCC AGGAGGGCGT GGCTTCCCTG GGTGGCTATG CCGACGTGTT CCAGAAGAAT GTGCTGGCGT CCGGCGTGAT CCCGCAGATC AGCATGATCA TGGGCCCCTG CGCGGGCGGA GCGGTATACA GCCCGGCCAT GACCGACTTC ATCTTCATGG TCAAGGACAG CTCGTACATG TTCGTGACCG GCCCCGAGGT CGTGAAGACC GTCACGCACG AAGAGGTCAC GGCCGAAGAG CTGGGCGGCG CCGTGACACA CACCACCAAG AGCGGTGTGG CCGACATGGC GTTTGAGAAC GACGTGGAGG CGCTGATGAT GCTGCGCCGC CTGTACAACT ACCTGCCGCT CAACAACCGC GAAAAAGCCC CGGTGCGCCC CAGCAACGAC CCGGCCGACC GCATGGACCT GAGCCTGGAC ACCCTGGTGC CCGAGAACCC CAACAAGCCC TACGACATGA AGGAGCTGAT CCTCAAGACG GTGGACGACG GGGACTTCTT TGAGCTGCAG CCCGAGTACG CCAAGAACAT CATCATCGGC TTTGCCCGCA TGGAAGGCCA GACCGTGGGC ATCGTGGCCA ACCAGCCGCT GGTGCTGGCG GGCTGCCTGG ACATCAAGAG CTCCATCAAG GCTGCGCGCT TCGTGCGCTT CTGCGATGCG TTCAACATTC CCGTGGTCAC CTTCGTGGAC GTGCCCGGCT TCATGCCCGG CACCTCGCAG GAATACGGCG GCATCATCAA GCACGGCGCC AAGCTGCTCT ATGCGTACGC CGAATGCACG GTGCCCAAGA TCACCGTCAT CACGCGCAAG GCATACGGCG GCGCGTACGA CGTGATGAGC TCCAAGCACC TGCGCGGCGA CGTGAACCTG GCCTGGCCGA ACGCCGAGAT CGCCGTGATG GGCGCCAAGG GCGCGGTGGA AATCATCTTC CGCGAGGACA AGAACGACCC CGCCAAGCTG GCCGCCCGCG AGGCTGAGTA CAAGGCGCGC TTTGCCAACC CGTTCGTCGC CGGCGCACGC GGCTTCATCG ACGATGTGAT CCTGCCGCAC GAGACGCGCA AGCGTATCTG CCGCAGCCTG GCCATGCTCA AGAACAAGCA GCTCGATAAC CCGTGGCGCA AGCACGGGAA CATTCCGCTG TAA
|
Protein sequence | MQDILDQLEK KRELARLGGG QKRIDAQHKK GKLTARERIE LLLDDGTFEE WDMFVEHRCT DFGMENTKIP GDGVVTGYGM INGRLVFVFS QDFTVFGGAL SETHAEKICK VMDQAMKVGA PVIGLNDSGG ARIQEGVASL GGYADVFQKN VLASGVIPQI SMIMGPCAGG AVYSPAMTDF IFMVKDSSYM FVTGPEVVKT VTHEEVTAEE LGGAVTHTTK SGVADMAFEN DVEALMMLRR LYNYLPLNNR EKAPVRPSND PADRMDLSLD TLVPENPNKP YDMKELILKT VDDGDFFELQ PEYAKNIIIG FARMEGQTVG IVANQPLVLA GCLDIKSSIK AARFVRFCDA FNIPVVTFVD VPGFMPGTSQ EYGGIIKHGA KLLYAYAECT VPKITVITRK AYGGAYDVMS SKHLRGDVNL AWPNAEIAVM GAKGAVEIIF REDKNDPAKL AAREAEYKAR FANPFVAGAR GFIDDVILPH ETRKRICRSL AMLKNKQLDN PWRKHGNIPL
|
| |