| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2040 |
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| Symbol | |
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| ID | 4672172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2147775 |
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| End bp | 2149937 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639839118 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_986292 |
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| Protein GI | 121594396 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCC ATCCTGATCC CATCTTCCAG TCCGCCGACC TTGCCGCCTG GGCCAAGGCC
GCGGCCAAGT CCGCGCCCGG CGGCGACGTG AATGCCCTGA ACTGGGTGAC GCCCGACGGC
ATCAGCGTGA AGCCCCTGTA CACGGCGCAA GACACGCAGG ACCTGCCCTA CGCCAACACG
CTGCCGGGCT TCGAGCCCTA CCTGCGCGGC CCGCAGGCCA CCATGTACGC CGTGCGCCCC
TGGACCATCC GCCAGTACGC GGGCTTTTCC ACGGCCGAAG AATCCAACGC CTTCTACCGC
AAAGCGCTGG CCGCGGGCGG GCAGGGTGTG TCGGTGGCCT TTGACCTGGC CACGCACCGC
GGCTACGACA GCGACCACCC GCGCGTGACG GGCGACGTGG GCAAGGCGGG CGTCGCCATC
GACAGCGTGG AGGACATGAA GATCCTGTTC GACGGCATTC CGCTGGACAA GGTGTCTGTT
TCCATGACCA TGAACGGCGC CGTGCTGCCG GTGCTGGCGG GCTACGTGGT GGCAGCGGAG
GAGCAGGGCG TGAGCCAGGA CAAGCTGGCC GGGACCATCC AGAACGACAT CCTCAAGGAG
TTCATGGTCC GCAACACCTA CATCTATCCT CCCAAGCCGT CGATGCGCAT CATCGGCGAC
ATCATCGAGT ACACGAGCAA GAACATGCCC AAGTTCAACT CGATCTCGAT CTCGGGCTAC
CACATGCAGG AAGCCGGCGC CAACCAGGCG CTGGAACTGG CCTTCACCCT GGCCGACGGC
AAGGAATACG TGAAGACGGC CATCGCCAAG GGCATGGACG TGGACGATTT CGCCGGGCGC
CTGTCGTTCT TCTGGGCGAT CGGCATGAAC TTCTACCTGG AGATCGCCAA GATGCGCGCC
GCGCGCCTGC TGTGGTGCCG CATCATGAAG GGTTTCAACG CCAAAAACCC CAAGAGCCTG
ATGCTGCGCA CCCACTGCCA GACGTCGGGG TGGTCGCTCA CCGCGCAGGA CCCGTACAAC
AACGTGGTGC GCACCACCAT CGAGGCCATG GCGGCCGTGT TCGGCGGCAC GCAAAGCCTG
CACACCAACG CGCTGGACGA AGCCATAGCG CTGCCCACCG AATTCAGCGC ACGCATCGCG
CGCAACACGC AGCTCATCAT CCAGGAAGAG ACCCACATCA CCAACGTGAT CGACCCCTGG
GCCGGCTCCT ACATGATGGA AAAGCTCACC CAGGACATGG CCGACGCCGC CTGGAAGATC
ATCGAAGAGG TCGAGGCGAT GGGCGGCATG ACCGCCGCCG TGGACTCCGG CTGGGCCAAG
CTCAAGATCG AGGCCGCGGC TGCGGAAAAG CAGGCGCGCA TCGATTCGGG CAAGGAAGTC
ATCGTCGGCG TGAACAAGTA CAAGCTTGCC AAGGAAGACC CGGTGGACAT CCTGGAGGTG
GACAACGTCA AGGTGCGCGA GAACCAGATC GCGCGCCTCA ACGCCATCAA GGCAAAACGC
GATCAAAGCG CCGTGGATCA ATCGCTGGCC GCTCTTACTT CTGCAGCAGA AAGCGGCCAA
GGCAACCTGC TGGATCTGTC GATCCAGGCG ATTCGCGCAC GCGCCACGGT GGGCGAGGTG
TCCGACGCGT TGGAAAAAAT CTTCGGGCGC CACCGCGCCG ATACGCAAAA GGTGACCGGT
GTGTACGCTG CTGCCTACGA CTCGGCCGAA GGCTGGGAAA AGCTCAAGGG TGAAATCGAT
CAGGCCGCCG AACAGCTCGG TCGCCGCCCG CGCGTGATGA TCGCCAAGCT CGGCCAGGAC
GGCCACGACC GCGGCGCCAA GGTGGTGGCC ACGGCCTTTG CCGACCTGGG GTTCGATGTC
GACATGGGCC CGCTGTTCCA GACCCCCGAG GAGTGCGCGC GCCAGGCCAT CGAGAACGAC
GTGCACGCCG TGGGCGTCTC CACCCTGGCC GCGGGCCACA AGACGCTGGT GCCCGCCATC
ATCGAAGAAC TGAAAAAGCA GGGCGCCGAC GACATCATCG TCTTCGTGGG CGGCGTGGTG
CCCGCGCAGG ACTACGACTT CCTCTACGGT GCAGGCGTCA AGGGCGTCTA TGGCCCCGGC
ACGCCGATCC CGGCCAGCGC CAAGGATGTG CTGGAGCAAA TCAAGAAGGC GCAGGCGCAG
TGA
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| Protein sequence | MSSHPDPIFQ SADLAAWAKA AAKSAPGGDV NALNWVTPDG ISVKPLYTAQ DTQDLPYANT
LPGFEPYLRG PQATMYAVRP WTIRQYAGFS TAEESNAFYR KALAAGGQGV SVAFDLATHR
GYDSDHPRVT GDVGKAGVAI DSVEDMKILF DGIPLDKVSV SMTMNGAVLP VLAGYVVAAE
EQGVSQDKLA GTIQNDILKE FMVRNTYIYP PKPSMRIIGD IIEYTSKNMP KFNSISISGY
HMQEAGANQA LELAFTLADG KEYVKTAIAK GMDVDDFAGR LSFFWAIGMN FYLEIAKMRA
ARLLWCRIMK GFNAKNPKSL MLRTHCQTSG WSLTAQDPYN NVVRTTIEAM AAVFGGTQSL
HTNALDEAIA LPTEFSARIA RNTQLIIQEE THITNVIDPW AGSYMMEKLT QDMADAAWKI
IEEVEAMGGM TAAVDSGWAK LKIEAAAAEK QARIDSGKEV IVGVNKYKLA KEDPVDILEV
DNVKVRENQI ARLNAIKAKR DQSAVDQSLA ALTSAAESGQ GNLLDLSIQA IRARATVGEV
SDALEKIFGR HRADTQKVTG VYAAAYDSAE GWEKLKGEID QAAEQLGRRP RVMIAKLGQD
GHDRGAKVVA TAFADLGFDV DMGPLFQTPE ECARQAIEND VHAVGVSTLA AGHKTLVPAI
IEELKKQGAD DIIVFVGGVV PAQDYDFLYG AGVKGVYGPG TPIPASAKDV LEQIKKAQAQ
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