| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2038 |
|---|
| Symbol | |
|---|
| ID | 4672208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2145017 |
|---|
| End bp | 2146846 |
|---|
| Gene Length | 1830 bp |
|---|
| Protein Length | 609 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639839116 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_986290 |
|---|
| Protein GI | 121594394 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCCC CCACCCCCGA CCTGCGCGGC GTGCAGACGC TGCCCGAACT GCTGGCGTTC
CGCGCCGCCC TCACTCCCCA CAGCGAGGCG TACCGCGCCT GCGACCCCGG CACCGGCCAG
TGGATCAGCC TGACCTGGGC ACAGACCCAG GAGCGCGTGC AGCAGTGCAG CCGCGCCATT
GCCGCATCGG GCCTGCCACA GGGGGCGCGC ATCGCCATCC TGCTGCCCAA CGGGCTGGAT
GCCATGAGCA TCGACCAGGC TGTGATGGCC ACGGGCTGTG TGCCCGTGCC TCTGCATGCC
ATCGACAATC CGGGCAGCAT TGCCTACATC CTGGCGGATG CCGAGGTGTC GCTGCTCGTC
GTGGAAGAGC CCGAGCAATG GCGGCGCATC CGCGACGTGG GCATGCCGCT GCCGCACCTG
ATGGGCGTGG TGACGACCAA CGCCAGCACC GGCCTGCCCA CCGCCGCCGA GCAGGACGTA
CCGGTCGCAC CGCTGGCTGC CTGGCTGCAG CATGCCGCGG CAGATACGCC GCTGCCCTCG
CCGCCCGGCC CTGAGGATCT GGCGGCGATC GTCTACACCA GCGGCACTAC CGGCAAGCCC
AAGGGGGTGA TGCTCAGCCA TGCCAACGTG GTGGCCGACG TGAAGGCGGT GCTGGAGCGC
ATCGCCCCCA CGCCACAGGA TGTGTTCCTG TCCTTCCTGC CGCTGTCGCA CACCTTCGAG
CGCACGGGCG GCTACTACCT GCCCATGGCC TCGGGCAGTT GCGTGGTCTA TGCGCGCTCG
GTGGCGCAAC TGGCGGAGGA CTTGAAGAAT GTGCGCCCCA CGGTGCTGGT GTCGGTGCCG
CGCATTTATG AACGCGTGCA TGCCAAGCTC ATCGAGACGC TGTCGCCCTC GCCCTTGAAG
ATGCAGCTGT TCCAGGCCGC GCAGGCCGTG GGCTGGAAGC GGTTTTGCGC CGCGCAGCGC
CTGCCAGCAC CCCAGGACGA CGGCGCGGGC GGCTGGATGC GCGCCCTGCC CTGGCCGCTG
TTGCGTGCCC TGGTGGCCAA GCCGCTGCTG GCGCAGTTCG GTGGCCGCGT GCGCGTGGCC
GTGAGCGGGG GCGCGCCGCT GTCGCCCACC ATCGCGCACT GCTTCCTGGG CCTGGGCCTG
CAACTGGTGC AGGGTTACGG CATGACCGAA ACCTCGCCCG TGGTCAGCGT GAACACGCTG
GAGGACAACG ACCCGTCCAC CGTCGGCCGC GCCTTGCCGG GCGTGGAGGT GCGCATCGGC
GAGAACCGCG AACTGCAGGT GCGCGGCCCC ATCGTCATGA AGGGCTACTG GAAGCGCCCC
GAGGATACGG CCCGCACCGT CTCCGCCGAC GGCTGGCTGG GCACGGGCGA CCAGGCCGAG
ATCGTCGACG GCCGCATCCG CATCCTGGGA CGCATCAAGG AAATCATCGT CACCTCCACG
GGCGAGAAGG TGCCGCCGGC CGACCTGGAG CTGGCCATCA CCGCCGATGC GCTGTTCGAG
CAGGCCTTTG TGGTGGGCGA GCAGCGCCCC TTCATCGCCT GCGTGGCCGT GGTGCATGCC
GAAGAGTGGC GCCAACTGGC CGGGCAACTG GGACTGGACG CCAACGACCC TGCCAGCCTT
GCGCACCCCA GCGCCCAACG AGCGGCACTG GCGCGCATCG AGAAGCTGGC GGCCGGCTTC
CCGCGCTATG CGGTGCCGCG CGCCGTGCAT CTGGTGCGCG AGCCATGGAC GATCGAGAAC
GCGTTCATGA CACCCACGCT CAAGCTCAAG CGCACCAACC TCATGGCGCA CTACGCGGCC
GCCATCGAGG CCATGTACCA AAAGCGCTGA
|
|---|
| Protein sequence | MNSPTPDLRG VQTLPELLAF RAALTPHSEA YRACDPGTGQ WISLTWAQTQ ERVQQCSRAI
AASGLPQGAR IAILLPNGLD AMSIDQAVMA TGCVPVPLHA IDNPGSIAYI LADAEVSLLV
VEEPEQWRRI RDVGMPLPHL MGVVTTNAST GLPTAAEQDV PVAPLAAWLQ HAAADTPLPS
PPGPEDLAAI VYTSGTTGKP KGVMLSHANV VADVKAVLER IAPTPQDVFL SFLPLSHTFE
RTGGYYLPMA SGSCVVYARS VAQLAEDLKN VRPTVLVSVP RIYERVHAKL IETLSPSPLK
MQLFQAAQAV GWKRFCAAQR LPAPQDDGAG GWMRALPWPL LRALVAKPLL AQFGGRVRVA
VSGGAPLSPT IAHCFLGLGL QLVQGYGMTE TSPVVSVNTL EDNDPSTVGR ALPGVEVRIG
ENRELQVRGP IVMKGYWKRP EDTARTVSAD GWLGTGDQAE IVDGRIRILG RIKEIIVTST
GEKVPPADLE LAITADALFE QAFVVGEQRP FIACVAVVHA EEWRQLAGQL GLDANDPASL
AHPSAQRAAL ARIEKLAAGF PRYAVPRAVH LVREPWTIEN AFMTPTLKLK RTNLMAHYAA
AIEAMYQKR
|
|---|
| |