| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1993 |
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| Symbol | |
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| ID | 4673688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2093860 |
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| End bp | 2094771 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639839071 |
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| Product | 5-dehydro-4-deoxyglucarate dehydratase |
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| Protein accession | YP_986245 |
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| Protein GI | 121594349 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0280124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTCCCC AAGACCTGAA GAACGTGATG AGTTCCGGCC TGCTGTCGTT CCCCATCACC
GACTTCCATG ACAACGGCGA CTTCAATGCC AAGGGCTATG CCGAGCGCCT GGAGTGGCTC
GCTCCGTTCG GCGCCAGCGC ATTGTTTGCT GCGGGCGGTA CGGGCGAGTA CTTCTCGCTC
ACGGCCAGCG AATATCCGCA GATCATCCAG ACGGCGGTAA ACACCTGCCG CGGCAAGGTG
CCCATCATTG CCGGTGCGGG CGGCCCCACG CGCTTTGCCA TCGAATGCGC GCAGGCCGCC
GAGAAGGCCG GCGCGCACGG CATCCTGCTC ATGCCCCACT ACATGACAGA AGCCAGCCAG
GAAGGCCTGG CAGCCCACGT GGAAGCCGTG TGCAAGAGCG TGAATTTCGG CGTGATCATC
TACAACCGCG GCATCACCCG CTACACGCCG GAAACCGTTG CCCGCCTGTG CGAGCGCAAC
CCGAACCTGG TCGGCTTCAA GGATGGCGTG GGCGACATCG AGGGCATGGC CTCCATGTTC
CTGGCCATGG GCGACCGCCT GGCCTACCTG GGCGGCCTGC CCACGGCCGA GGTCTATGCC
GCCGCCTACA AGGCACTGGG CACGCCGGTG TATTCGTCCG CCGTGTTCAA CTTCATCCCG
AAAACAGCCA TGCGTTTCTA CGAAGCGGTG AAGAACGACG ACCAGGCCAC GCAACACCAG
TTGCTCAAGG ACTTCTTCAT GCCTTACCTG AAGATCCGCA ACCGCAGCGC CGGCTACGCG
GTGAGCATCA TCAAAGCCGG CGCCAAGATC GTCGGCCACC CCGCCGGCCC CGTGCGTGCG
CCGCTGGCCG ACTTGCAGGC TGAAGAGATC GAGATGCTGG CCGAACTGAT CCGCAAGGTC
GAGCCTGTCT GA
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| Protein sequence | MTPQDLKNVM SSGLLSFPIT DFHDNGDFNA KGYAERLEWL APFGASALFA AGGTGEYFSL
TASEYPQIIQ TAVNTCRGKV PIIAGAGGPT RFAIECAQAA EKAGAHGILL MPHYMTEASQ
EGLAAHVEAV CKSVNFGVII YNRGITRYTP ETVARLCERN PNLVGFKDGV GDIEGMASMF
LAMGDRLAYL GGLPTAEVYA AAYKALGTPV YSSAVFNFIP KTAMRFYEAV KNDDQATQHQ
LLKDFFMPYL KIRNRSAGYA VSIIKAGAKI VGHPAGPVRA PLADLQAEEI EMLAELIRKV
EPV
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