Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1941 |
Symbol | |
ID | 4673119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2033562 |
End bp | 2034533 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639839022 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_986197 |
Protein GI | 121594301 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0800788 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCTGA CCAAACTTGC GCTGGGCCTG GGCTTGGCAC TGGGCATGGC CGCAACGGCC TTGGCACAAA CCACGATGCG CATCAGCATC TCGACGGCGC AGAACTCCCA CCAGGGCGTC GCCATCGACA CGTTTGCCAA GGAGGTCGAG AAGCGCACCG GCGGGCGCTA CAAGGTGCAG ACCTTCTACA ACGGCGCGCT GGGCGGCGAG CGCGAATCCA TCGAGGCGGT GCAGTTGGGC ACGCAGGAGT TGGCCTTCAG CTCCACCGGT CCGGTGCCCA ACTTCGTGCC CGAGACCAAG GTCCTGGACG TGCCCTTCCT GTTCCGTGAC AAGGCCCACG CCCGCGCCGT GCTCGACGGC CCGATCGGCC AGGACCTGCT GAGCAAGTTC GATGCCAAGG GCTTCAAGGC TCTGGCCTGG GCGGAGAATG GCTTTCGCCA CATGACCAAC AGCAAGCGCG ACGTGAAGAC GCCCGAGGAT CTGAAGGGCC TGAAGATGCG CACCATGGAG AACCCGGTGC ACATCGCCGC GTACAAGGGT TTCGGCATCA TCACCACGCC CATGGCCTTC CCCGAAGTGT TCACCGCCCT GCAACAAGGC ACGGTGGACG GCCAGGAAAA CCCCCTGCCC GTCATCATCT CGGCCAAGTT CGACCAGGTA CAAAAGCACC TCTCGCTGAC GGGTCACGTG TACTCGCCCT GCCTCTTCGT GATGAACAAG GCGGTGTTCG ACAAGCTCTC ACCCGCGGAC AAGCAGGCCT TCATCGACGC CGCCAAGGAG GGCACCAAGG CCAACCGCGC TCGCGTGGAC GAGGACGACG CCAAGGGCGT GGCCGACCTG CGCGCCAAGG GCATGACGGT GATCGACGAT CTGGACAAGT CCAAGTTTGT CGCCGCGCTC GCGCCCGTGA ACGCGCAGTT CGAGAAAGAG TTCGGCAAGG CCAACCTCGA CAAGATCCGC AACTACAAGT GA
|
Protein sequence | MQLTKLALGL GLALGMAATA LAQTTMRISI STAQNSHQGV AIDTFAKEVE KRTGGRYKVQ TFYNGALGGE RESIEAVQLG TQELAFSSTG PVPNFVPETK VLDVPFLFRD KAHARAVLDG PIGQDLLSKF DAKGFKALAW AENGFRHMTN SKRDVKTPED LKGLKMRTME NPVHIAAYKG FGIITTPMAF PEVFTALQQG TVDGQENPLP VIISAKFDQV QKHLSLTGHV YSPCLFVMNK AVFDKLSPAD KQAFIDAAKE GTKANRARVD EDDAKGVADL RAKGMTVIDD LDKSKFVAAL APVNAQFEKE FGKANLDKIR NYK
|
| |