| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1940 |
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| Symbol | |
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| ID | 4673091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2032990 |
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| End bp | 2033484 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639839021 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_986196 |
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| Protein GI | 121594300 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0344722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCT TCTTCCTCTC CTGCGAGCGC TGGAGCACCG CCGTCGCCAT GTGGGGCGCC
TGCGCCATGC TGGCGCTGGC CTCGGCGCTC GGCATGTTCC AGATCCTGAT GCGTTTCGTT
TTCGAAGAGC CGGCCGAGTG GACCGAGGTG CTGATCCGCT TCAGCCTGAT CTGGATGGTG
TTTCTGGCGA TTCCCATGGC ATTCCGGCAG GGCGCCATGG TCAGCGTCGA CGTGCTCTAC
CGCTGGAGCC CGCGCCCGCT GCGGCGCGTG CTGGACTGGG TGGTGTGCCT GGCAGCGCTG
GCGCTCATCG CCGTGATCAT CTGGTGGGGG TGGGACTACG CGCGCCGCGG CGGCGTGCAG
TCGATGGCAG GGCTAGAGTC GGCTTCCATG TTCTGGGCCT ATCTGGCCAT GCCCGTGGGT
GGGCTGTTCA GCATCCTCGG CATCGTGGGC AATCTGATCG ACCCGCAGCG CCATGAACTG
GAGACTGCCC AATGA
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| Protein sequence | MKTFFLSCER WSTAVAMWGA CAMLALASAL GMFQILMRFV FEEPAEWTEV LIRFSLIWMV
FLAIPMAFRQ GAMVSVDVLY RWSPRPLRRV LDWVVCLAAL ALIAVIIWWG WDYARRGGVQ
SMAGLESASM FWAYLAMPVG GLFSILGIVG NLIDPQRHEL ETAQ
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